Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06271 and BPUM_3720
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:42
# Commandline: needle
# -asequence dna-align/BSNT_06271___rpsF.1.24716.seq
# -bsequence dna-align/BPUM_3720___rpsF.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06271___rpsF-BPUM_3720___rpsF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06271___rpsF-BPUM_3720___rpsF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06271___rpsF
# 2: BPUM_3720___rpsF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 289
# Identity: 271/289 (93.8%)
# Similarity: 271/289 (93.8%)
# Gaps: 2/289 ( 0.7%)
# Score: 1271.0
#
#
#=======================================
BSNT_06271___ 1 ATGAGAAAGTACGAAGTTATGTACATTATCCGCCCAAACA-TTGACGAAG 49
||||||||||||||||||||||||||.|||||||| |||| |||||||.|
BPUM_3720___r 1 ATGAGAAAGTACGAAGTTATGTACATCATCCGCCC-AACAGTTGACGATG 49
BSNT_06271___ 50 AGTCTAAAAAAGCAGTTATCGAGCGTTTCAACAACGTTCTGACTTCTAAC 99
||.||||||||||||||||||||||||||||.|||||..|.|||||||||
BPUM_3720___r 50 AGGCTAAAAAAGCAGTTATCGAGCGTTTCAATAACGTGTTAACTTCTAAC 99
BSNT_06271___ 100 GGTGCGGAGATCACTGGAACAAAGGATTGGGGTAAACGTCGTCTTGCTTA 149
|||||||||||||||||||||||||||||||||||||||||||||||.||
BPUM_3720___r 100 GGTGCGGAGATCACTGGAACAAAGGATTGGGGTAAACGTCGTCTTGCATA 149
BSNT_06271___ 150 CGAAATCAACGATTTCCGCGACGGTTTCTACCAAATCGTAAACGTTCAAT 199
||||||||||||||||||.||.||.|||||||||||||||||.|||||||
BPUM_3720___r 150 CGAAATCAACGATTTCCGTGAAGGCTTCTACCAAATCGTAAATGTTCAAT 199
BSNT_06271___ 200 CTGACGCTGCGGCAGTTCAAGAATTTGACCGTCTAGCTAAGATCAGTGAC 249
||||||||||.||||||||||||||||||||..|||||||||||||||||
BPUM_3720___r 200 CTGACGCTGCAGCAGTTCAAGAATTTGACCGCTTAGCTAAGATCAGTGAC 249
BSNT_06271___ 250 GATATCATTCGCCACATTGTTGTTAAAGAAGAAGAATAA 288
||||||||||||||||||||||||||||||||||.||||
BPUM_3720___r 250 GATATCATTCGCCACATTGTTGTTAAAGAAGAAGTATAA 288
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