Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03930 and BPUM_3709

See DNA alignment / Visit BSNT_03930 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:25
# Commandline: needle
#    -asequence pep-align/BSNT_03930___yrhM.1.24716.seq
#    -bsequence pep-align/BPUM_3709___yrhM.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03930___yrhM-BPUM_3709___yrhM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03930___yrhM-BPUM_3709___yrhM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03930___yrhM
# 2: BPUM_3709___yrhM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 286
# Identity:     155/286 (54.2%)
# Similarity:   211/286 (73.8%)
# Gaps:           2/286 ( 0.7%)
# Score: 807.0
# 
#
#=======================================

BSNT_03930___      1 MDKRLQQLREEYKNVPIPKELDIIVEKALQQEPKKKRIVMWPTSAAIAAA     50
                     |||.|:||:|||..:|||.|.|.:||:.|:::.||.....| |...:|||
BPUM_3709___y      1 MDKHLEQLKEEYLEIPIPPEFDAMVERTLKRKNKKPHFQQW-TIGLVAAA     49

BSNT_03930___     51 ILFTALVNINPDAAQAMSRIPVIGKIVKAITFIEIKEEKDQSSIDVKTPA    100
                     .||...||::|.||:|:|.:|:||::||.:||.|.|:....::||:|||.
BPUM_3709___y     50 ALFVTTVNVSPQAARAISEVPIIGELVKVVTFTEFKKSDQGTNIDLKTPH     99

BSNT_03930___    101 LSGLSNKELENSINQKYLKESQQLYKEFIQSTSKNKKGHLSIYSDYETVT    150
                     :|||.:.:|::|:|||||.|:::||::|.:.|...|.||||:.|.||..|
BPUM_3709___y    100 VSGLGDGKLQDSLNQKYLAENKKLYQDFEKETKGYKNGHLSVESGYEVKT    149

BSNT_03930___    151 DTPDLLSIRRNIEKTQASSYTQSRYITIDKKNDILLTLKSLFKDERYIKV    200
                     :...:||:.|....||||:..:..|.||||||.:|:||.|||||:|||.|
BPUM_3709___y    150 NNDQILSLGRYKVTTQASAAEEMTYDTIDKKNHVLITLPSLFKDDRYIDV    199

BSNT_03930___    201 ISQNIREQMKQQMKEDPNKIYWLTDED-AEPFKTILPDQTFYITEDHKLV    249
                     ||:||:||||:|||||.|||||:|.:| .:|||.|.|||:|||....|||
BPUM_3709___y    200 ISENIKEQMKKQMKEDSNKIYWMTKQDMVDPFKKIQPDQSFYINSKGKLV    249

BSNT_03930___    250 ISFDEYEVAPGYMGVTEFTIPTSVISNLLVGERYIR    285
                     |||:||:||||||||.||||||||:.::||.:.||.
BPUM_3709___y    250 ISFNEYDVAPGYMGVVEFTIPTSVLKDILVSDMYIH    285


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