Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_06224 and BPUM_3707
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:41
# Commandline: needle
# -asequence pep-align/BSNT_06224___yybS.1.24716.seq
# -bsequence pep-align/BPUM_3707___yybS.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_06224___yybS-BPUM_3707___yybS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06224___yybS-BPUM_3707___yybS.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06224___yybS
# 2: BPUM_3707___yybS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 318
# Identity: 129/318 (40.6%)
# Similarity: 205/318 (64.5%)
# Gaps: 9/318 ( 2.8%)
# Score: 689.0
#
#
#=======================================
BSNT_06224___ 1 ------MKQTRALMEGAILISLFAIITLLVVYVPVIGTILLFALPLPMIL 44
:|||:||:||||:||:|:::||..:|||::..|...|.|:|:||
BPUM_3707___y 1 MDRGEGVKQTKALVEGAIMISIFSVMTLFYLYVPLLSIIFFLAAPIPIIL 50
BSNT_06224___ 45 YTIRHGLKLGIWMGAVSLPVVFIVGSFNGLIVAFMSACAGIAMGHFFKRK 94
||||||||.||..||:.:.:.|::||.|||:.|.:....|:.||.|:.|:
BPUM_3707___y 51 YTIRHGLKKGIAAGAIGIVISFLIGSINGLMTAPVLIAVGLGMGVFYSRR 100
BSNT_06224___ 95 EPGHAIISGALIYMLSIVFYFVISIQFLGINIIDEAMTQYRQSLDMVETV 144
:||:|||:|.|||:.|.:..|::|:|...|:|::.|.....|.:.|||:.
BPUM_3707___y 101 QPGNAIIAGGLIYLFSFLISFIVSVQLFQIDIMNIAKESIEQMMPMVEST 150
BSNT_06224___ 145 AKQSG-NAGQFEKQLKLMEEQLGIVQYLFPTAIVMVGVIFSFLSYLIAKP 193
.|||| :..:..||||..:|.........|.|:::...:.:|:::...:|
BPUM_3707___y 151 LKQSGASEKEIAKQLKQFKELQDTALNALPVALLITATLMAFVNHWFVRP 200
BSNT_06224___ 194 LLRRFSPDIPNLKPFRELKFPQSVVVLYLIIVMLSFLPLEKGQMLYSIAL 243
|::||..|:|.||.|::|:.|:|:|..||:.::|..:..|||..|:.:..
BPUM_3707___y 201 LIKRFVSDMPVLKKFKDLRLPKSMVWYYLLTLLLMLIQTEKGSFLWLVQS 250
BSNT_06224___ 244 NGEFILGFLIFIQGLSFIFFYCHKKQYPKAAAVIAVILGFVHPVFMAAIR 293
:...||..|:.|||.||||:|||:|...||..:.|::||.::|.....:|
BPUM_3707___y 251 SAFKILFILVLIQGFSFIFYYCHEKGISKAVPIFAIVLGVLYPPVGVVVR 300
BSNT_06224___ 294 ILGVLDMGFHIRNKVK-- 309
|:|:.|:||.:|.|||
BPUM_3707___y 301 IIGIADIGFDLREKVKNK 318
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