Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00308 and BPUM_3702
See
DNA alignment /
Visit
BSNT_00308 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:13
# Commandline: needle
# -asequence pep-align/BSNT_00308.1.24716.seq
# -bsequence pep-align/BPUM_3702___ybbA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00308-BPUM_3702___ybbA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00308-BPUM_3702___ybbA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00308
# 2: BPUM_3702___ybbA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 250
# Identity: 104/250 (41.6%)
# Similarity: 144/250 (57.6%)
# Gaps: 7/250 ( 2.8%)
# Score: 487.0
#
#
#=======================================
BSNT_00308 1 MKGSLSEHKAGNRRFTLYLPPSYSTDSGGFPAVYVQDGSSLFQNQIELLE 50
|||:....:...|:..:||||..:| ..|||.||||||||...|..||
BPUM_3702___y 1 MKGTFLYEELNGRQLDIYLPPHSNT---LMPAVIVQDGSSLFHQHILSLE 47
BSNT_00308 51 SAFQQQRLPELVLIGIEPENRLDEYTPWPAASLSDRFTDFGGMGYHYLSD 100
...:.:.:..:|||||.|.|||||||||.|.||...|..|.|....||:.
BPUM_3702___y 48 EMIEGRSIMPVVLIGIHPINRLDEYTPWEAPSLHSSFPAFKGEADTYLAF 97
BSNT_00308 101 ITNQFIPLIEENWNVTREPQSRGMIGASLGGLISMFAILKYPSMFGKIGS 150
:|:|.:|.:.:.:.|..:.:...:||||||||:||:|:.|..|.|..|||
BPUM_3702___y 98 LTDQLMPYLVQYYPVEPDDRQHALIGASLGGLVSMYALWKKQSFFQHIGS 147
BSNT_00308 151 ISGSYWYENAAETIHISSLKPGTARVFMSIGSEEGCEKQSIQRHMLKKTK 200
:|||:||.:....:.....|....|:::|:|||||.||.|.|:||:..|:
BPUM_3702___y 148 LSGSFWYPHFMPYVRQHHPKALPQRIYLSVGSEEGKEKSSAQQHMVPFTE 197
BSNT_00308 201 QVHQSLKEKGFTEDQLCLSIEKGAVHHRKYFCKQFINALEWLYGKNRSTL 250
::|..|...|..:.||.|.||....||...|.:.|::||:|.||..
BPUM_3702___y 198 ELHHILHGYGMPKHQLRLHIEYREGHHISQFQRNFVSALKWFYGAK---- 243
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.