Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00365 and BPUM_3698
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:16
# Commandline: needle
# -asequence pep-align/BSNT_00365___ybdO.1.24716.seq
# -bsequence pep-align/BPUM_3698___ybdO.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00365___ybdO-BPUM_3698___ybdO.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00365___ybdO-BPUM_3698___ybdO.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00365___ybdO
# 2: BPUM_3698___ybdO
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 395
# Identity: 135/395 (34.2%)
# Similarity: 210/395 (53.2%)
# Gaps: 75/395 (19.0%)
# Score: 673.5
#
#
#=======================================
BSNT_00365___ 1 MRLNRQFIRTQLMAQNILSKNAPAKRENATENPAAVLEKAYSRLKSQSST 50
BPUM_3698___y 0 -------------------------------------------------- 0
BSNT_00365___ 51 GGINQFNYSKTSVSGNSGAFSKVYQSANDRTVTDTGEETVIQSQNHYESE 100
...:.|..:|| :|::...|...::.|:|.|...:|
BPUM_3698___y 1 --------MNINTSYTAGA-------SNNQNRIDYKGQSAIKSTNEVMTE 35
BSNT_00365___ 101 SDIRIKILDEKYSRMNAINKTKSDPLGYIKDKYQNSKSPYFRSDLSAAER 150
:|.|:|||||||.::|..||...||.|:|.|||:|..|||:|:||:..||
BPUM_3698___y 36 ADRRMKILDEKYEKINEQNKRFQDPHGHIFDKYRNPHSPYYRNDLTKPER 85
BSNT_00365___ 151 QAAYDNETEWLFKGKAQNYNLQDAVFRN-VTFHGEVEAENEKVYQRGQVN 199
:|||..|..|...|:...||..||:||| ..:....|:..:|::.|.:||
BPUM_3698___y 86 EAAYSMEIGWANHGRGGYYNFNDAIFRNEKRYDPTQESVEKKLFNRQKVN 135
BSNT_00365___ 200 QQLQVLLNRNHIHIPEGTELTFTITPIDYQVRVSGSDDQDLIKQIEQVLQ 249
:|||.|.::|.|.||:....||||.|..:::.|.||.|:.|.|.||.:|.
BPUM_3698___y 136 EQLQDLFSKNGITIPKNMNFTFTIDPNHFKLVVGGSTDESLTKLIEDLLN 185
BSNT_00365___ 250 SGDNSKELFLHIMKSQSSDSAQFSEEAYQKYQAAREMYEVTGYHLKDLEV 299
:.:|::|||.|||||::.||.||:.::..|:....::..||||:||||.:
BPUM_3698___y 186 TSNNTRELFFHIMKSRNDDSTQFTPDSLAKFHLVNQIKTVTGYNLKDLNI 235
BSNT_00365___ 300 IDGRYVTPEGRDLMDVYKEELEKDPVQKQTASYAISYYRSELSKIAEAGY 349
::|::||.:|.::.|:|||:|.|:|...:.|..|.|:|.::|..:|:.|:
BPUM_3698___y 236 VNGQFVTDKGVNIFDIYKEDLLKNPYTAEHARIAASHYGAQLFDLAKNGF 285
BSNT_00365___ 350 NAIPDFILSIDYSNGSLRDVGQSKSYGTGDTGWLEALKRQTGVNY 394
::|||.:|||.|.||||.|:||.::||...| :|..:
BPUM_3698___y 286 DSIPDLVLSIGYQNGSLHDIGQKENYGVKKT--VENKR------- 321
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