Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_06200 and BPUM_3689
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:40
# Commandline: needle
# -asequence pep-align/BSNT_06200___yycF.1.24716.seq
# -bsequence pep-align/BPUM_3689___yycF.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_06200___yycF-BPUM_3689___yycF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06200___yycF-BPUM_3689___yycF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06200___yycF
# 2: BPUM_3689___yycF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 236
# Identity: 216/236 (91.5%)
# Similarity: 228/236 (96.6%)
# Gaps: 1/236 ( 0.4%)
# Score: 1141.0
#
#
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BSNT_06200___ 1 MMDKKILVVDDEKPIADILEFNLRKEGYEVHCAHDGNEAVEMVEELQPDL 50
|:||||||||||||||||||||||||||||||:|||||:|||||::||:
BPUM_3689___y 1 -MEKKILVVDDEKPIADILEFNLRKEGYEVHCAYDGNEALEMVEEIKPDI 49
BSNT_06200___ 51 ILLDIMLPNKDGVEVCREVRKKYDMPIIMLTAKDSEIDKVIGLEIGADDY 100
||||||||||||||||||||||||||||||||||||||||||||:|||||
BPUM_3689___y 50 ILLDIMLPNKDGVEVCREVRKKYDMPIIMLTAKDSEIDKVIGLELGADDY 99
BSNT_06200___ 101 VTKPFSTRELLARVKANLRRQLTTAPAEEEPSSNEIHIGSLVIFPDAYVV 150
|||||||||||||||||||||:.|...|||..||:|.||||||:||||||
BPUM_3689___y 100 VTKPFSTRELLARVKANLRRQIATPQTEEESESNDIEIGSLVIYPDAYVV 149
BSNT_06200___ 151 SKRDETIELTHREFELLHYLAKHIGQVMTREHLLQTVWGYDYFGDVRTVD 200
|||:||||||||||||||||||||||||||||||||||||||||||||||
BPUM_3689___y 150 SKREETIELTHREFELLHYLAKHIGQVMTREHLLQTVWGYDYFGDVRTVD 199
BSNT_06200___ 201 VTVRRLREKIEDNPSHPNWIVTRRGVGYYLRNPEQD 236
|||||||||||||||||:||||||||||||||||||
BPUM_3689___y 200 VTVRRLREKIEDNPSHPSWIVTRRGVGYYLRNPEQD 235
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