Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_06197 and BPUM_3686

See DNA alignment / Visit BSNT_06197 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:39
# Commandline: needle
#    -asequence pep-align/BSNT_06197___yycI.1.24716.seq
#    -bsequence pep-align/BPUM_3686___yycI.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06197___yycI-BPUM_3686___yycI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06197___yycI-BPUM_3686___yycI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06197___yycI
# 2: BPUM_3686___yycI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 290
# Identity:     128/290 (44.1%)
# Similarity:   187/290 (64.5%)
# Gaps:          13/290 ( 4.5%)
# Score: 645.0
# 
#
#=======================================

BSNT_06197___      1 MEWNKTKSIFIVAFLILDIFLGYQFFQKWQATGKEYEVIKNDVEHDMKAD     50
                     |||||||:|||:|||:||||||:|:|:| ::|.....:.|.|...:||||
BPUM_3686___y      1 MEWNKTKTIFILAFLVLDIFLGFQYFEK-RSTDHFAIIEKTDTLEEMKAD     49

BSNT_06197___     51 HITYEGLNKEATEGYRITANQKSFSKEEIEALKDQKPLMDMP--SDDHKV     98
                     .|.|..|:.||..||||||.:|.::|::::.|.|||.....|  ..|..|
BPUM_3686___y     50 GIKYGNLSDEAKIGYRITAEKKQYTKKDVDELADQKAKSTFPKTDKDDPV     99

BSNT_06197___     99 TSLKMKFANPIALSKKDIEDDAQALVSSKIQDGEKYKLWKVDKSKKEIIF    148
                     |.|:|.|..|:||.|||::..|..||:.::.||:.||||.:|:...:|:|
BPUM_3686___y    100 TLLEMTFNKPVALPKKDMKTAAANLVNQRLLDGKNYKLWSIDEEAGKIVF    149

BSNT_06197___    149 FQTYEGHYIYQKTDNPSNMIGQVVLHLNGKNEVVSYDQTTLETFKQIQKE    198
                     ||||:|.||:|:..:.|..||::.|.||.|||||||.|:.:.:..:::||
BPUM_3686___y    150 FQTYKGKYIFQEGLDDSETIGKITLDLNDKNEVVSYQQSMVTSINEVRKE    199

BSNT_06197___    199 SLITEMDAVELLYYQNQLKEYSTVKSCKFGYVAQYPLTSTQVLAPVWRIT    248
                     :|:..::.|:.||.||.|.:.:|||..:.||..|||..||||:.||||  
BPUM_3686___y    200 TLVPALETVKDLYTQNMLSQNTTVKKVELGYYTQYPGASTQVMVPVWR--    247

BSNT_06197___    249 VEYDKKVNGEKKTVQEYFTVNALESTILDTDQ--------    280
                     ||.:....|.||..:|.:.:||::.:.||..:        
BPUM_3686___y    248 VELEGVSTGSKKKTEEEYLINAIDGSTLDHIEKDDKSSME    287


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