Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_06196 and BPUM_3685

See DNA alignment / Visit BSNT_06196 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:39
# Commandline: needle
#    -asequence pep-align/BSNT_06196___yycJ.1.24716.seq
#    -bsequence pep-align/BPUM_3685___yycJ.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06196___yycJ-BPUM_3685___yycJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06196___yycJ-BPUM_3685___yycJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06196___yycJ
# 2: BPUM_3685___yycJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 264
# Identity:     233/264 (88.3%)
# Similarity:   247/264 (93.6%)
# Gaps:           0/264 ( 0.0%)
# Score: 1212.0
# 
#
#=======================================

BSNT_06196___      1 MSLQFSVLASGSTGNAFYLETEDHAFLVDAGLSGKAMDGLMAQIGRKLDD     50
                     |||||||||||||||||||||.:||||||||||||.|..|::||.||.:|
BPUM_3685___y      1 MSLQFSVLASGSTGNAFYLETGEHAFLVDAGLSGKQMVELLSQIDRKPED     50

BSNT_06196___     51 VDGIFVTHEHSDHIKGLGVVARKYKLPIYANEKTWKAMENQIGKIDTDQK    100
                     :||||||||||||||||||:|||||||:|||.|||||||:.||||||:||
BPUM_3685___y     51 LDGIFVTHEHSDHIKGLGVMARKYKLPVYANAKTWKAMESHIGKIDTEQK    100

BSNT_06196___    101 FVFPMETVKSFGGLDVESFGVSHDAAEPMFYVFHYNGRKLALMTDTGYVS    150
                     |.|.||||:||||||||||||||||||||||||||.||||||||||||||
BPUM_3685___y    101 FHFDMETVQSFGGLDVESFGVSHDAAEPMFYVFHYGGRKLALMTDTGYVS    150

BSNT_06196___    151 DRMKGIIRSANVFVFESNHDVGMLQMGRYPWSIKRRILSDVGHVSNEDAA    200
                     |||||||:|||.||||||||||||||||||||||||||||||||||||||
BPUM_3685___y    151 DRMKGIIQSANTFVFESNHDVGMLQMGRYPWSIKRRILSDVGHVSNEDAA    200

BSNT_06196___    201 LAMTDVIGDETSRIYLAHLSQDNNMKELARMSVQQTLASKGFVTGETFDL    250
                     |||||||||.||||||||||||||||:||||:|||||..||||.|:.|||
BPUM_3685___y    201 LAMTDVIGDATSRIYLAHLSQDNNMKDLARMAVQQTLEMKGFVVGDGFDL    250

BSNT_06196___    251 YDTDPKKATPLCAV    264
                     ||||||||||||||
BPUM_3685___y    251 YDTDPKKATPLCAV    264


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