Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_06180 and BPUM_3683
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:38
# Commandline: needle
# -asequence pep-align/BSNT_06180___yycN.1.24716.seq
# -bsequence pep-align/BPUM_3683___yycN.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_06180___yycN-BPUM_3683___yycN.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06180___yycN-BPUM_3683___yycN.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06180___yycN
# 2: BPUM_3683___yycN
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 179
# Identity: 81/179 (45.3%)
# Similarity: 115/179 (64.2%)
# Gaps: 24/179 (13.4%)
# Score: 455.0
#
#
#=======================================
BSNT_06180___ 1 -----------------------MTIMLTPMQSEEFRSYLTYTTKHYAEE 27
..:.|.||...::...:..:.:.||||
BPUM_3683___y 1 MTSSLRGLVFFACSSYDGEKGAIRLVTLQPMSQTDYDVLMEKSIQRYAEE 50
BSNT_06180___ 28 KVKAGTWLPEDAQLLSKQAFTDLLPRGLETPHHHLWSLKLNEKDTVGWLW 77
||:||||..|::...:::.|..|||.||:|.||.||:| ||.::.:||:|
BPUM_3683___y 51 KVRAGTWEEEESLANAEEQFDRLLPEGLQTEHHELWNL-LNGEEAIGWVW 99
BSNT_06180___ 78 IHAEPEHPQQEAFIYDFGLYEPYRGKGYAKQALAALDHTARSMGIRKLSL 127
:..:|.|||:|.|||:|.|:|.|||||:||||:|||:..|:|:|::||||
BPUM_3683___y 100 LCYDPNHPQKEGFIYNFFLFETYRGKGFAKQAIAALEEEAKSLGVQKLSL 149
BSNT_06180___ 128 HVFAHNQTARKLYEQTGFQETDVVMSKKI 156
|||||||.||.|||:|||:||.:.|||.:
BPUM_3683___y 150 HVFAHNQIARSLYEKTGFEETGIYMSKPL 178
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