Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05960 and BPUM_3668
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:30
# Commandline: needle
# -asequence pep-align/BSNT_05960___yxjI.1.24716.seq
# -bsequence pep-align/BPUM_3668___yxjI.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05960___yxjI-BPUM_3668___yxjI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05960___yxjI-BPUM_3668___yxjI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05960___yxjI
# 2: BPUM_3668___yxjI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 172
# Identity: 50/172 (29.1%)
# Similarity: 85/172 (49.4%)
# Gaps: 13/172 ( 7.6%)
# Score: 253.0
#
#
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BSNT_05960___ 1 MIELFMKQKMFSFKDAFHIYDRDEQETFKVEGRFFSLGDSLQMTDSSGKT 50
|.:|:||||:||....|.:.|:.|.:.:.|||.|..:..:..:.::....
BPUM_3668___y 1 MKQLYMKQKVFSLSGRFTVKDQQENDVYVVEGSFMKMPKTFTILNTERHE 50
BSNT_05960___ 51 LVSIEQKLMSLLPRYEISIGGKTVCEVTKKVTFFKPKFVISGLNWEIDGD 100
:..|.:|:.:.||::.:.:||:.|..:.|:.||||.|:.|.....|:.|:
BPUM_3668___y 51 IAVITKKMFTFLPKFLVEVGGQEVLTIKKEFTFFKAKYSIDAAGIEVQGN 100
BSNT_05960___ 101 LWRDEFQLTDGENVRMSVSKKWLSWGDSYHLQIANEGDVLICTAIAIVLD 150
.|...||:.....|...|.|:|.:|||||.:.|..|....:..|:.:.:|
BPUM_3668___y 101 WWDMNFQVLQNGEVIGQVKKEWFTWGDSYKVDILKEEMEPVMIALVVAID 150
BSNT_05960___ 151 MVLYNDEDESIF---------- 162
.| ..||:..
BPUM_3668___y 151 CV---KADEAASRSSSSATTNS 169
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