Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00970 and BPUM_3652
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:38
# Commandline: needle
# -asequence pep-align/BSNT_00970___ydgF.1.24716.seq
# -bsequence pep-align/BPUM_3652___aapA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00970___ydgF-BPUM_3652___aapA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00970___ydgF-BPUM_3652___aapA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00970___ydgF
# 2: BPUM_3652___aapA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 460
# Identity: 259/460 (56.3%)
# Similarity: 335/460 (72.8%)
# Gaps: 14/460 ( 3.0%)
# Score: 1416.5
#
#
#=======================================
BSNT_00970___ 1 MTDDMTKDNINQQTLQRGLKNRHIQLIAIGGAIGTGLFLGSGKSIHFAGP 50
:.||.|:|.|.|||:|||||||.|||||||||||:|..|||
BPUM_3652___a 1 ---------MEQQELKRDLSNRHVQLIAIGGTIGTGLFLGSGKAIQLAGP 41
BSNT_00970___ 51 SILFAYMITGIICFLIMRSLGELLLSNLNYHSFVDFVQDYLGDMAAFITG 100
||:|||.|.|:..|.:||:|||||||...|.|..|..:||||..|:|:||
BPUM_3652___a 42 SIIFAYFIVGMAIFFVMRALGELLLSKTGYQSLTDIAEDYLGPWASFVTG 91
BSNT_00970___ 101 WTYWFCWISIAMADLTAVGLYTQYWLPGVPQWVPGLIALIILLIMNLATV 150
||||||||..||||:.|||:|.|||. .:|||:|.:|.|:|||..||.||
BPUM_3652___a 92 WTYWFCWIMTAMADVIAVGVYVQYWF-DIPQWIPAIICLLILLGFNLLTV 140
BSNT_00970___ 151 KLFGELEFWFALIKVIAILALIVIGLVMIFKGFSTSSGVSSFTNLWSHGG 200
|||||:||||||||||.||.||.:|:|::..||.|.:|..:.||||||||
BPUM_3652___a 141 KLFGEMEFWFALIKVITILLLIGVGIVLLIIGFQTDAGPVTVTNLWSHGG 190
BSNT_00970___ 201 LFPNGMHGFILSFQMVVFAFVGIELVGLTAGETENPEKVIPKAINNIPVR 250
|||:|:.||:||||||:||:||:||||::|.||.||:|.||.|||.||:|
BPUM_3652___a 191 LFPHGVTGFLLSFQMVIFAYVGVELVGVSAAETANPQKNIPSAINKIPLR 240
BSNT_00970___ 251 VLLFYIGALLVIMSIYPWDVINPSESPFVQVFVAVGIVGAASIINFVVLT 300
:|.||:||:.|::.|.||..::.||||||:.|..:||..||.:|||||||
BPUM_3652___a 241 ILFFYVGAIFVLLCINPWTELSASESPFVKTFGLIGIPVAAGLINFVVLT 290
BSNT_00970___ 301 SAASACNSAVFSTSRMVYSLAKDHNAPESMAKLTQRKVPRNALFFSAIVI 350
||||||||.:|||||::|:|:.....|.|..:|.:..||.||||.|.||:
BPUM_3652___a 291 SAASACNSGMFSTSRILYNLSHQKQGPSSFGRLNKHAVPSNALFVSTIVV 340
BSNT_00970___ 351 LIGVTLNYIMPEGVFTLITSISTVCFIYIWGITVICHMKYRKTRPELAKT 400
.:|..|:.::||..|.::|:||.:|||::|.|.:|||:||:||:|||...
BPUM_3652___a 341 SVGALLSKLIPEQAFGIVTTISAICFIWVWSIILICHLKYKKTKPELHAA 390
BSNT_00970___ 401 NKFKLPLYPFTNYLILAFLAFVLVVLALAQDTRVSLFVTPVWFILLIVIY 450
:.||.|..||.|..:|...|.:||::..|..||.:|.:|||||..|::||
BPUM_3652___a 391 STFKAPFTPFVNICVLVLFAAILVIMLFADATRPALLLTPVWFGFLLLIY 440
BSNT_00970___ 451 --KVRKAKHQ 458
|.|:|.
BPUM_3652___a 441 ARKKRRAS-- 448
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