Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02017 and BPUM_3641
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:31
# Commandline: needle
# -asequence pep-align/BSNT_02017___rapK.1.24716.seq
# -bsequence pep-align/BPUM_3641___rapK.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02017___rapK-BPUM_3641___rapK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02017___rapK-BPUM_3641___rapK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02017___rapK
# 2: BPUM_3641___rapK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 400
# Identity: 141/400 (35.2%)
# Similarity: 246/400 (61.5%)
# Gaps: 37/400 ( 9.2%)
# Score: 748.5
#
#
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BSNT_02017___ 1 MSKLASEYVANFLNEWYMAIKQQNVEAAEKYFKEVKSLFDDMEEDQEVLM 50
|:.:::|.|.|.||:|.:||::.:|::|...:.|:|.|..:|||:||||.
BPUM_3641___r 1 MAIISAEQVGNRLNDWRIAIRKHDVQSANAMYTELKQLLQEMEENQEVLT 50
BSNT_02017___ 51 YYSLLEERHKMMMYQVKGTDFPKHSYFNKRHAREI---QKTDNMIEYYFF 97
||||||.::|:|:|:.:|....:.: |: .||:::|||||:
BPUM_3641___r 51 YYSLLEGKYKLMIYERRGKTLKEQT--------ELDCPSKTNDLIEYYFY 92
BSNT_02017___ 98 LFEALYESYNRNFENAISLFKIAEKKLSIIPDEIEAAEFYSKVASMYMML 147
|::|||.||||::.:||.|||||||||..||||||.|||::|:|::||:|
BPUM_3641___r 93 LYKALYASYNRDYASAIGLFKIAEKKLQNIPDEIEVAEFHTKIANLYMLL 142
BSNT_02017___ 148 RQSIVSLNYINNALNIYKGNENYKRKYATALMVVGTNYTDLGQFDKAEEA 197
|||::||:||.||::|:|.:|.|:|:.|:|.::...||.|:|.|.:||..
BPUM_3641___r 143 RQSLISLHYIQNAVDIFKSHEGYERRLASAFVISAANYMDIGDFTRAENY 192
BSNT_02017___ 198 YFQAIRISKELDDKFFEAQIHHNLSITYSAANRSQDCLNALRKAIRNKEW 247
|.:|:.|:..|:|:|..:|:.||:||.|:.|..|:.|::||.:|:.::.:
BPUM_3641___r 193 YKKALHIADSLNDRFLASQLFHNISILYAEAGESKKCIDALEQALSDENY 242
BSNT_02017___ 248 RQSVYYINSLYMATKELFLMDQKDKAVYYYKKGQENLTQKENKVYEAKIN 297
..|.|:.::::|..|||..:|::.:|:||::...:....::..:|.||:|
BPUM_3641___r 243 LSSCYFHHTMFMLVKELLSIDERTQALYYFELVNQKHESEKCPIYTAKLN 292
BSNT_02017___ 298 IIYAL-LQDNQNETIEQCWSYIHFLQEKNDLDSVLDLSLIISQYCEEKEC 346
::|.| ..::.::..:.|:..|..|:|..|.:...:||.:.:::.|:...
BPUM_3641___r 293 LLYHLYFTEDMSQKAQACFEEISILKELKDAEGACELSALAAKHFEDLGA 342
BSNT_02017___ 347 YKDALEFSKRAILAEKKMRQLEGIG------------------------- 371
...|..|.|.|......:.:.....
BPUM_3641___r 343 IHQAYLFLKEAYHMNHPIFEWRNSNEKNEFIVHRFNHCRFRTNSVFQFVK 392
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