Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02017 and BPUM_3641

See DNA alignment / Visit BSNT_02017 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:31
# Commandline: needle
#    -asequence pep-align/BSNT_02017___rapK.1.24716.seq
#    -bsequence pep-align/BPUM_3641___rapK.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02017___rapK-BPUM_3641___rapK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02017___rapK-BPUM_3641___rapK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02017___rapK
# 2: BPUM_3641___rapK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 400
# Identity:     141/400 (35.2%)
# Similarity:   246/400 (61.5%)
# Gaps:          37/400 ( 9.2%)
# Score: 748.5
# 
#
#=======================================

BSNT_02017___      1 MSKLASEYVANFLNEWYMAIKQQNVEAAEKYFKEVKSLFDDMEEDQEVLM     50
                     |:.:::|.|.|.||:|.:||::.:|::|...:.|:|.|..:|||:||||.
BPUM_3641___r      1 MAIISAEQVGNRLNDWRIAIRKHDVQSANAMYTELKQLLQEMEENQEVLT     50

BSNT_02017___     51 YYSLLEERHKMMMYQVKGTDFPKHSYFNKRHAREI---QKTDNMIEYYFF     97
                     ||||||.::|:|:|:.:|....:.:        |:   .||:::|||||:
BPUM_3641___r     51 YYSLLEGKYKLMIYERRGKTLKEQT--------ELDCPSKTNDLIEYYFY     92

BSNT_02017___     98 LFEALYESYNRNFENAISLFKIAEKKLSIIPDEIEAAEFYSKVASMYMML    147
                     |::|||.||||::.:||.|||||||||..||||||.|||::|:|::||:|
BPUM_3641___r     93 LYKALYASYNRDYASAIGLFKIAEKKLQNIPDEIEVAEFHTKIANLYMLL    142

BSNT_02017___    148 RQSIVSLNYINNALNIYKGNENYKRKYATALMVVGTNYTDLGQFDKAEEA    197
                     |||::||:||.||::|:|.:|.|:|:.|:|.::...||.|:|.|.:||..
BPUM_3641___r    143 RQSLISLHYIQNAVDIFKSHEGYERRLASAFVISAANYMDIGDFTRAENY    192

BSNT_02017___    198 YFQAIRISKELDDKFFEAQIHHNLSITYSAANRSQDCLNALRKAIRNKEW    247
                     |.:|:.|:..|:|:|..:|:.||:||.|:.|..|:.|::||.:|:.::.:
BPUM_3641___r    193 YKKALHIADSLNDRFLASQLFHNISILYAEAGESKKCIDALEQALSDENY    242

BSNT_02017___    248 RQSVYYINSLYMATKELFLMDQKDKAVYYYKKGQENLTQKENKVYEAKIN    297
                     ..|.|:.::::|..|||..:|::.:|:||::...:....::..:|.||:|
BPUM_3641___r    243 LSSCYFHHTMFMLVKELLSIDERTQALYYFELVNQKHESEKCPIYTAKLN    292

BSNT_02017___    298 IIYAL-LQDNQNETIEQCWSYIHFLQEKNDLDSVLDLSLIISQYCEEKEC    346
                     ::|.| ..::.::..:.|:..|..|:|..|.:...:||.:.:::.|:...
BPUM_3641___r    293 LLYHLYFTEDMSQKAQACFEEISILKELKDAEGACELSALAAKHFEDLGA    342

BSNT_02017___    347 YKDALEFSKRAILAEKKMRQLEGIG-------------------------    371
                     ...|..|.|.|......:.:.....                         
BPUM_3641___r    343 IHQAYLFLKEAYHMNHPIFEWRNSNEKNEFIVHRFNHCRFRTNSVFQFVK    392


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