Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01537 and BPUM_3621
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:04
# Commandline: needle
# -asequence pep-align/BSNT_01537___yhcH.1.24716.seq
# -bsequence pep-align/BPUM_3621___yhcH.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01537___yhcH-BPUM_3621___yhcH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01537___yhcH-BPUM_3621___yhcH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01537___yhcH
# 2: BPUM_3621___yhcH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 317
# Identity: 160/317 (50.5%)
# Similarity: 223/317 (70.3%)
# Gaps: 20/317 ( 6.3%)
# Score: 785.5
#
#
#=======================================
BSNT_01537___ 1 MKTVLELKNVTKNIRGRTIINDLSFTIREGEVFGFLGPNGAGKTTTIRMM 50
|..||||.||:::|.|:.|:.||||:::.|||||||||||||||||||||
BPUM_3621___y 1 MTNVLELHNVSRHIHGKKIVQDLSFSVQAGEVFGFLGPNGAGKTTTIRMM 50
BSNT_01537___ 51 VGLMKLSKGDVLICGQSITKEYAKAIKHIGAIVENPELYKFLSGYKNLQQ 100
|||..::.||:||.|.||...|..||:.:|||:||||:|..|:..:||..
BPUM_3621___y 51 VGLSPITSGDILINGHSIQSSYQHAIQDVGAIIENPEMYNHLTARQNLVH 100
BSNT_01537___ 101 YARMVKGVTKEKIDEVVELVGLTDRIHDKVKTYSLGMRQRLGLAQCLLHD 150
:|||...|.:.:|||::|||.|....|.:|:|:||||:||||:||.|:|.
BPUM_3621___y 101 FARMNGKVDEGRIDELLELVSLQHVKHKRVRTFSLGMKQRLGIAQALIHR 150
BSNT_01537___ 151 PKVLILDEPTNGLDPAGIREIRDHLKKLTRERGMAVIVSSHLLSEMELMC 200
||:||||||||||||.|||.|||:|::|.:|.|:||||||||:|||||||
BPUM_3621___y 151 PKLLILDEPTNGLDPEGIRMIRDYLRRLAKEEGLAVIVSSHLMSEMELMC 200
BSNT_01537___ 201 DRIAILQKGKLIDIQNVKDE-NIDENDTYFFQV--EQPNEAAAVLNQYDL 247
||.||:||||||.|::.:.| |.||...|..:| ::..|...::..::
BPUM_3621___y 201 DRFAIIQKGKLIAIEDQRAETNQDELVNYRMKVASDELEETKKLIGIFE- 249
BSNT_01537___ 248 LSKTNGVEIK---------LAKDEVPAVIELLVMQQIRIYEVKVITKSLE 288
.|..:: ||::::|.:|..|....|.:||:|:..::||
BPUM_3621___y 250 ----EGTTVREEEQYLFFSLAEEKMPELIRHLSGASIHLYEIKIEKQTLE 295
BSNT_01537___ 289 DRFLEMTGETKEEVQHA 305
|:||.:||:.:.:|
BPUM_3621___y 296 DKFLSLTGKKEADV--- 309
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