Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01537 and BPUM_3621

See DNA alignment / Visit BSNT_01537 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:04
# Commandline: needle
#    -asequence pep-align/BSNT_01537___yhcH.1.24716.seq
#    -bsequence pep-align/BPUM_3621___yhcH.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01537___yhcH-BPUM_3621___yhcH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01537___yhcH-BPUM_3621___yhcH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01537___yhcH
# 2: BPUM_3621___yhcH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 317
# Identity:     160/317 (50.5%)
# Similarity:   223/317 (70.3%)
# Gaps:          20/317 ( 6.3%)
# Score: 785.5
# 
#
#=======================================

BSNT_01537___      1 MKTVLELKNVTKNIRGRTIINDLSFTIREGEVFGFLGPNGAGKTTTIRMM     50
                     |..||||.||:::|.|:.|:.||||:::.|||||||||||||||||||||
BPUM_3621___y      1 MTNVLELHNVSRHIHGKKIVQDLSFSVQAGEVFGFLGPNGAGKTTTIRMM     50

BSNT_01537___     51 VGLMKLSKGDVLICGQSITKEYAKAIKHIGAIVENPELYKFLSGYKNLQQ    100
                     |||..::.||:||.|.||...|..||:.:|||:||||:|..|:..:||..
BPUM_3621___y     51 VGLSPITSGDILINGHSIQSSYQHAIQDVGAIIENPEMYNHLTARQNLVH    100

BSNT_01537___    101 YARMVKGVTKEKIDEVVELVGLTDRIHDKVKTYSLGMRQRLGLAQCLLHD    150
                     :|||...|.:.:|||::|||.|....|.:|:|:||||:||||:||.|:|.
BPUM_3621___y    101 FARMNGKVDEGRIDELLELVSLQHVKHKRVRTFSLGMKQRLGIAQALIHR    150

BSNT_01537___    151 PKVLILDEPTNGLDPAGIREIRDHLKKLTRERGMAVIVSSHLLSEMELMC    200
                     ||:||||||||||||.|||.|||:|::|.:|.|:||||||||:|||||||
BPUM_3621___y    151 PKLLILDEPTNGLDPEGIRMIRDYLRRLAKEEGLAVIVSSHLMSEMELMC    200

BSNT_01537___    201 DRIAILQKGKLIDIQNVKDE-NIDENDTYFFQV--EQPNEAAAVLNQYDL    247
                     ||.||:||||||.|::.:.| |.||...|..:|  ::..|...::..:: 
BPUM_3621___y    201 DRFAIIQKGKLIAIEDQRAETNQDELVNYRMKVASDELEETKKLIGIFE-    249

BSNT_01537___    248 LSKTNGVEIK---------LAKDEVPAVIELLVMQQIRIYEVKVITKSLE    288
                         .|..::         ||::::|.:|..|....|.:||:|:..::||
BPUM_3621___y    250 ----EGTTVREEEQYLFFSLAEEKMPELIRHLSGASIHLYEIKIEKQTLE    295

BSNT_01537___    289 DRFLEMTGETKEEVQHA    305
                     |:||.:||:.:.:|   
BPUM_3621___y    296 DKFLSLTGKKEADV---    309


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