Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01538 and BPUM_3620
See
DNA alignment /
Visit
BSNT_01538 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:04
# Commandline: needle
# -asequence pep-align/BSNT_01538___yhcI.1.24716.seq
# -bsequence pep-align/BPUM_3620___yhcI.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01538___yhcI-BPUM_3620___yhcI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01538___yhcI-BPUM_3620___yhcI.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01538___yhcI
# 2: BPUM_3620___yhcI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 323
# Identity: 135/323 (41.8%)
# Similarity: 202/323 (62.5%)
# Gaps: 16/323 ( 5.0%)
# Score: 641.5
#
#
#=======================================
BSNT_01538___ 1 MLNLIYNEWLKIFSRAGTWVMIGILGLTMVG---FAFLANHFSAGESNSH 47
|:.||.|||:||..|.|||:|:|:|.|.|:. ||...| ...:::..
BPUM_3620___y 1 MIRLIQNEWMKISYRIGTWIMVGLLVLGMIATLIFAVKTN--DGDQASGD 48
BSNT_01538___ 48 WKQELQAQNAELKKEIKED--PSLKDGYKETITLNDYRIEHNIP--SDTG 93
||.|||:.|...|:|:||| ...|...::.|.:|:|||:|::| ...|
BPUM_3620___y 49 WKTELQSINKAKKQELKEDNIGFYKRSLEKDIAINEYRIKHDLPPADQFG 98
BSNT_01538___ 94 YTVWSYVTDSANFTILTGLFTIIIAAGIVANEFNWGTIKLLMIRPLSRFQ 143
...|:||..:|:...|.|:|.|||||.||:.|:..||||||:|||.||.:
BPUM_3620___y 99 KNAWAYVKINADLLQLVGVFVIIIAATIVSAEYKHGTIKLLLIRPPSRMK 148
BSNT_01538___ 144 ILMSKYITVLLFGLLLLLILFIGSTLLGLIFFGTGGETAANIHLIYKDGH 193
||:|||.||.|:.|.|:.:|||.|.:||.||||...: .:||.|::|.
BPUM_3620___y 149 ILLSKYFTVQLYSLFLIAVLFILSFILGAIFFGLNHD---YVHLAYQNGE 195
BSNT_01538___ 194 VIEQNMMGHLATTYLSESVSALMVATMAFMLSAVFRNSSLAVGFSIFLLV 243
|||::...::.:.||:.....:::.|::|.:|.|||:.::::..|:...|
BPUM_3620___y 196 VIERSQFANMVSYYLAHCAMFVVLGTLSFAISTVFRSEAISIAISVLAYV 245
BSNT_01538___ 244 AGTIATAFIAAKFDWAKYILFANVDLTQYVDGTP-LIKGMTMTFSLVMLA 292
.|...|:.:...||||||:|||| |..||...|| .|:.|::.|||::|.
BPUM_3620___y 246 VGASITSILMFFFDWAKYLLFAN-DPAQYFADTPTFIEDMSLGFSLIVLV 294
BSNT_01538___ 293 IYFIIFLLLAFGIFMKRDIAN-- 313
||:.|||.:|..:|.||::..
BPUM_3620___y 295 IYWAIFLAIALIVFQKREVKTGS 317
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.