Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05161 and BPUM_3617
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:48
# Commandline: needle
# -asequence pep-align/BSNT_05161___lacA.1.24716.seq
# -bsequence pep-align/BPUM_3617___lacA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05161___lacA-BPUM_3617___lacA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05161___lacA-BPUM_3617___lacA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05161___lacA
# 2: BPUM_3617___lacA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 690
# Identity: 379/690 (54.9%)
# Similarity: 486/690 (70.4%)
# Gaps: 6/690 ( 0.9%)
# Score: 2068.5
#
#
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BSNT_05161___ 1 MSKLEKTHVTEAKFMLHGGDYNPDQWLDRPDILADDIKLMKLSHTNTFSV 50
|.|............||||||||||||..|:|:.:|.:||||:|..|||:
BPUM_3617___l 1 MGKRYPLVHPNVNGFLHGGDYNPDQWLHMPEIIDEDFRLMKLAHCQTFSI 50
BSNT_05161___ 51 GIFAWSALEPEEGVYQFEWLDDIFERIHSIGGRVILATPSGARPAWLSQT 100
.||.||.||||||.|.|.|||||.:|:.:.|...||||||||||||||||
BPUM_3617___l 51 NIFGWSKLEPEEGQYDFAWLDDIMDRLAAQGAHAILATPSGARPAWLSQT 100
BSNT_05161___ 101 YPEVLRVNASRVKQLHGGRHNHCLTSKVYREKTRHINRLLAERYGHHPAL 150
|||||||.|:|.:.|||.|||||.||.:|||||..:||||||||..||||
BPUM_3617___l 101 YPEVLRVEANRQRNLHGLRHNHCFTSPIYREKTNTLNRLLAERYKDHPAL 150
BSNT_05161___ 151 LMWHISNEYGGDCHCDLCQHAFREWLKSKYDNSLKTLNQAWWTPFWSHTF 200
:||||||||||:|||||||.|||.:||.||::.|:.|||||||.|||||:
BPUM_3617___l 151 IMWHISNEYGGECHCDLCQEAFRGYLKDKYNHDLEALNQAWWTGFWSHTY 200
BSNT_05161___ 201 NDWSQIESPSPIGENGLHGLNLDWRRFVTDQTISFYKNEIIPLKELTPDI 250
:||||||||:|.||:.:||:||||:||||.|||:||:|||.||:||||.|
BPUM_3617___l 201 SDWSQIESPAPHGEHMIHGMNLDWKRFVTAQTINFYQNEIEPLRELTPHI 250
BSNT_05161___ 251 PITTNFMADTPDLIPYQGLDYSKFAKHVDVISWDAYPVWHNDWESTADLA 300
|:|||||.|.|.:.|:.||||.:|||.|||||||:||.||:..|:||:||
BPUM_3617___l 251 PVTTNFMGDYPHMRPFLGLDYHQFAKEVDVISWDSYPAWHSGRETTAELA 300
BSNT_05161___ 301 MKVGFINDLYRSLKQ-QPFLLMECTPSAVNWHNVNKAKRPGMNLLSSMQM 349
..|.|::|||||||. ||||:||.|||.||||.|||.|..||..||::|.
BPUM_3617___l 301 SNVAFVHDLYRSLKDGQPFLVMESTPSLVNWHEVNKVKHKGMAHLSAIQA 350
BSNT_05161___ 350 IAHGSDSVLYFQYRKSRGSSEKLHGAVVDHDNSPKNRVFQEVAKVGETLE 399
||||||||||||:|:.||:|||.|||||||......|||||||.:|:.||
BPUM_3617___l 351 IAHGSDSVLYFQWRQGRGASEKFHGAVVDHSGHEHTRVFQEVADLGKQLE 400
BSNT_05161___ 400 RLSEVVGTKRTAQTAILYDWENHWALEDAQGFAKATKRYPQTLQQHYRTF 449
.|..:.||....:.||:||||||||::||||.....|||.:..|.|||:|
BPUM_3617___l 401 HLQPIAGTSVQPEVAIIYDWENHWAIDDAQGLNNTNKRYVEACQTHYRSF 450
BSNT_05161___ 450 WEHDIPVDVITKEQDFSPYKLLIVPMLYLISEDTISRLKAFTADGGTLVM 499
|:..||||::..|:|||.|::||.||||:|......:::||...||..:.
BPUM_3617___l 451 WKKGIPVDIVGMEKDFSSYRVLIGPMLYMIKPGVAEKIEAFVKTGGIFIA 500
BSNT_05161___ 500 TYISGVVNEHDLTYTGGWHPDLQAIFGVEPLETDTLYPKDRNAVSY-RSQ 548
||.||:|:|:||.:.||:...|:.:.|:...|.:||.|.:...::. ..:
BPUM_3617___l 501 TYWSGMVDENDLCFLGGFPGPLRHVLGIWAEEINTLMPDEHVLMTTGNGR 550
BSNT_05161___ 549 IYEMKDYATVIDVKTASVEAVYQEDFYARTPAVTSHEYQQGKAYFIGARL 598
.|.:..|...|..:||||...::...|...||:|.|.:..||||::.:..
BPUM_3617___l 551 TYHVGQYCESIHPETASVLGHFENGCYEGQPALTVHSFGDGKAYYMASEN 600
BSNT_05161___ 599 EDQFQRDFYEGLITDLSLSPVFPVRHGKGVSVQARQDQDNDYIFIMNFTE 648
|..|..:|||.||..:.:.||......:|||||.|.|...||:|:|||||
BPUM_3617___l 601 EQIFYDEFYEDLIVGMDIQPVLSAEIPEGVSVQKRTDGSQDYVFMMNFTE 650
BSNT_05161___ 649 EKQLVTFD--QSVKDIMTGDILSGDLTMEKYEVRIVVNTH 686
::||::.| :|.::::||..:..:|.::.||..|:..
BPUM_3617___l 651 KQQLLSLDSEESYQNMLTGQYVPQELQLDPYEYMIMKK-- 688
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