Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05160 and BPUM_3616

See DNA alignment / Visit BSNT_05160 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:48
# Commandline: needle
#    -asequence pep-align/BSNT_05160___yvfO.1.24716.seq
#    -bsequence pep-align/BPUM_3616___yvfO.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05160___yvfO-BPUM_3616___yvfO.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05160___yvfO-BPUM_3616___yvfO.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05160___yvfO
# 2: BPUM_3616___yvfO
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 449
# Identity:     164/449 (36.5%)
# Similarity:   227/449 (50.6%)
# Gaps:          67/449 (14.9%)
# Score: 728.0
# 
#
#=======================================

BSNT_05160___      1 ----MKSKVKLFFAAAIVWSACSSTGYAAAIEKEKHVSKLRAEDLFVKKV     46
                         |...|.:||...:        |.         :.:.:|:.:.|:.:
BPUM_3616___y      1 MKKWMLVTVVVFFLMGL--------GI---------LPEAKADAISVQPI     33

BSNT_05160___     47 EGMNKDFIKGADVSSVIALENSGVTFYNTSGKRQDIFTTLKQAGVNYVRV     96
                     .|:..||.||||:|.:..:|.||..:::.:||:.|....||:.||||||:
BPUM_3616___y     34 NGLQGDFTKGADISMLAEVERSGGRYFDQNGKQVDPLKLLKEKGVNYVRI     83

BSNT_05160___     97 RIWNHPYDSNGNGYGGGNNDVQKAIEIGKRATANGMKVLADFHYSDFWAD    146
                     |:||||||:.|..|.||.||:..||.:.|||.|..||||.||||||||.|
BPUM_3616___y     84 RLWNHPYDNQGRAYNGGTNDLNTAIALSKRAKAQNMKVLLDFHYSDFWTD    133

BSNT_05160___    147 PAKQKVPKAWANLSFEAKKAKLYEYTKQSLQKMIKEGFDIGMVQVGNETT    196
                     |.||..|||||:||.......:..||...|:.|..:.....|||||||..
BPUM_3616___y    134 PGKQFKPKAWASLSQNDLVKAVGTYTGDVLKTMKAQNALPNMVQVGNELN    183

BSNT_05160___    197 GGF-----------AGETDWTKMCQLFNEGSRAVRETNSNILVALHFTNP    235
                     .|.           .||.|  ::..|...|:.|||..:|||.:.||..:.
BPUM_3616___y    184 SGMLWPNGKSWGEGGGEFD--RLAALLKAGTNAVRSVDSNINIMLHLAHG    231

BSNT_05160___    236 ETAGRYSFIAETLSKNKVDYDVFASSYYPFWHGTLQNLTSVLKAVANTYG    285
                     ...|...:..:.::|..|.:|....||||:|.|....||:.:..::..|.
BPUM_3616___y    232 GDNGASRWWFDEITKRGVSFDTIGLSYYPYWDGGFGGLTNNMNDISARYQ    281

BSNT_05160___    286 KKVMVAETSYTYTAEDGDGHGNTAPK-SGQTLPYPISVQGQATAVRDVME    334
                     |.|:|.||:|.:|..:||...|:..: |..|..||.|.||||:.:||:.|
BPUM_3616___y    282 KDVIVVETAYGFTTANGDNLENSFNQDSVNTAGYPASPQGQASFIRDLSE    331

BSNT_05160___    335 AVA----NTGKAGLGVFYWEPAWIPVGPKTQIEKNKVLWETYGSGWASSY    380
                     .::    |.||   |.|||||.|||               ..|:.|:|.:
BPUM_3616___y    332 KISQVKNNRGK---GFFYWEPLWIP---------------AKGAPWSSQF    363

BSNT_05160___    381 AAEYDPEDAGKWYGGSAVDNQALFDFNGHPLPSLQVFQYAESGHIPKKR    429
                     ...| .:..|.  .|:|.:|||:|||||..||||.||:....       
BPUM_3616___y    364 GLAY-IQTTGT--VGNAWENQAMFDFNGKALPSLDVFKQMTP-------    402


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