Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05162 and BPUM_3615

See DNA alignment / Visit BSNT_05162 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:49
# Commandline: needle
#    -asequence pep-align/BSNT_05162___yvfM.1.24716.seq
#    -bsequence pep-align/BPUM_3615___yvfM.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05162___yvfM-BPUM_3615___yvfM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05162___yvfM-BPUM_3615___yvfM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05162___yvfM
# 2: BPUM_3615___yvfM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 283
# Identity:     195/283 (68.9%)
# Similarity:   235/283 (83.0%)
# Gaps:           3/283 ( 1.1%)
# Score: 1012.0
# 
#
#=======================================

BSNT_05162___      1 MLADMKVRKYIRLLFSYLLLAFMAVIIVYPLLWTAGASFNPGNSLISTSI     50
                       ...|..|.|||..:|.:|...::.|:||||||.||||||||||:|||:
BPUM_3615___y      1 --MGSKQNKLIRLSITYFILFIASICILYPLLWTIGASFNPGNSLMSTSM     48

BSNT_05162___     51 IPKHPTFDHYKELFAGKESLQYVQWYVNSMKISLFTMAGSLLCVTFTAYA    100
                     .||:|||.|:.|||.|:.:| |.:||.||||||:.||..:|:.|:||.||
BPUM_3615___y     49 FPKNPTFSHFTELFFGQGAL-YAKWYWNSMKISIATMLLTLILVSFTGYA     97

BSNT_05162___    101 FSRFRFKGRKYALTLFLLLQMIPQFSALIALFVLAQILGMINSHWLLILL    150
                     ||||||||||..|.||||||||||||||||:|||||:||:||||..|||:
BPUM_3615___y     98 FSRFRFKGRKNGLMLFLLLQMIPQFSALIAIFVLAQMLGLINSHLALILI    147

BSNT_05162___    151 YIGGLIPMNTYLMKGYMDSIPMDLDESAKIDGASSTRIFFQIILPLSKPM    200
                     |.||.|||||||||||:|:||.||||||::|||...|||.|||:||:||:
BPUM_3615___y    148 YAGGQIPMNTYLMKGYLDAIPKDLDESARMDGAGHFRIFIQIIMPLAKPI    197

BSNT_05162___    201 AAVVAMNGFTGPLGDFVLSSTILRTPESYTLPVGLFNLVNDVMGASYTTF    250
                     .||||:|.||||||||::||.|:|:||.||||:||:|||:|.||||||||
BPUM_3615___y    198 LAVVAINSFTGPLGDFIISSVIVRSPEMYTLPIGLYNLVSDKMGASYTTF    247

BSNT_05162___    251 AAGALLISIPVAVIFIMLQKNFVSGLTAGGTKG    283
                     |||||||:||||::|::|||.||||||.|||||
BPUM_3615___y    248 AAGALLIAIPVALLFLVLQKQFVSGLTQGGTKG    280


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