Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05165 and BPUM_3613
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:49
# Commandline: needle
# -asequence pep-align/BSNT_05165___yvfK.1.24716.seq
# -bsequence pep-align/BPUM_3613___cycB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05165___yvfK-BPUM_3613___cycB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05165___yvfK-BPUM_3613___cycB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05165___yvfK
# 2: BPUM_3613___cycB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 424
# Identity: 244/424 (57.5%)
# Similarity: 319/424 (75.2%)
# Gaps: 6/424 ( 1.4%)
# Score: 1265.0
#
#
#=======================================
BSNT_05165___ 1 MKMAKKCSVFMLCAAVSLSLAACGPKE--SSSAKSSSKGSE-LVVWEDKE 47
||..|..::..:.....|.|:||||.: ||.::.:|.|:: |:||||.:
BPUM_3613___c 1 MKKGKWATLSAVVGTAVLLLSACGPGDDNSSGSQPASTGTKTLLVWEDVK 50
BSNT_05165___ 48 KSIGIKDAVAAFEKEHDVKVKVVEKPYAKQIEDLRMDGPAGTGPDVLTMP 97
||.||:|||..|||:||||:|||||.||.|||.||:||.|||||||:|||
BPUM_3613___c 51 KSDGIQDAVKEFEKQHDVKIKVVEKAYADQIEALRLDGAAGTGPDVITMP 100
BSNT_05165___ 98 GDQIGTAVTEGLLKELHVKKDVQSLYTDASIQSQMVDQKLYGLPKAVETT 147
.||||:|||||||:|:...:.|...:||.|||||.||.|||||||:||||
BPUM_3613___c 101 HDQIGSAVTEGLLQEMKPDQKVIDSFTDESIQSQTVDGKLYGLPKSVETT 150
BSNT_05165___ 148 VLFYNKDLISEKELPKTLEEWYDYSKKTANGSQFGFLALFDQIYYAESVM 197
|||||||:: |:.|.||:.|||.|||.....::||:|.:|:||||:||:
BPUM_3613___c 151 VLFYNKDIV--KKAPTTLDGWYDLSKKLTKDGKYGFVAKWDEIYYAQSVL 198
BSNT_05165___ 198 SGYGGYIFGKAKDGSYNPSDIGINNEGAVKGAALIQKFYKDGLFPAGIIG 247
.|.|||||.:..||||:.:|||:||:|||:|...:|||:.:||||.||||
BPUM_3613___c 199 GGSGGYIFKQKSDGSYDVNDIGLNNDGAVQGGEYVQKFFSEGLFPKGIIG 248
BSNT_05165___ 248 EQGINVLESLFTEGKAAAIISGPWNVEAFSKAGINYGITKLPKLENGKNM 297
|||||||.|||||.||||:|||||:...:.:|||:||:|:||.|.|||:|
BPUM_3613___c 249 EQGINVLNSLFTEKKAAAVISGPWSFGPYKEAGIDYGVTELPTLPNGKHM 298
BSNT_05165___ 298 SSFIGVKSYNVSAFSKNEELAQELAVFLANEKNSKTRYEETKEVPAVKSL 347
|||:||||||||::|||:|||::...|:.||||:|.|:|.|:|:|.||.|
BPUM_3613___c 299 SSFLGVKSYNVSSYSKNKELAEKFVEFITNEKNAKKRFEVTEEIPPVKKL 348
BSNT_05165___ 348 ANDPAIMKSEAARAVTEQSRFSEPTPNIPEMNEIWTPADSALQTVATGKA 397
..||.|.::..|.|:::|::::..|||.|||.|:|.|.||||..:|||:.
BPUM_3613___c 349 MKDPVITENANADAISKQTKYATLTPNNPEMAEVWKPIDSALGLIATGRT 398
BSNT_05165___ 398 DPKQALDQAAETAKGQIKAKHSGK 421
|.|:|.|.|......||||.||.
BPUM_3613___c 399 DVKKAFDDAVNQIDSQIKANHSK- 421
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