Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05165 and BPUM_3613
See
Amino acid alignment /
Visit
BSNT_05165 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:49
# Commandline: needle
# -asequence dna-align/BSNT_05165___yvfK.1.24716.seq
# -bsequence dna-align/BPUM_3613___cycB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05165___yvfK-BPUM_3613___cycB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05165___yvfK-BPUM_3613___cycB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05165___yvfK
# 2: BPUM_3613___cycB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1388
# Identity: 841/1388 (60.6%)
# Similarity: 841/1388 (60.6%)
# Gaps: 244/1388 (17.6%)
# Score: 2263.0
#
#
#=======================================
BSNT_05165___ 1 ATGAAAATGGCAAAAAAGTGTTCCGTATTCATGCTCTGCGCAGCTGTCAG 50
|||||||.||.|||| ||..|...||| || ||||.||| |
BPUM_3613___c 1 ATGAAAAAGGGAAAA---TGGGCGACATT-AT--------CAGCAGTC-G 37
BSNT_05165___ 51 T--------------TTATCCTTGGCGGCTTGCGGCCCAAAGGA------ 80
| ||.|.||| .||||||||||.|| ||||
BPUM_3613___c 38 TTGGGACTGCTGTACTTCTGCTT-TCGGCTTGCGGACC--AGGAGATGAC 84
BSNT_05165___ 81 -----AAGC--AGCAGCGCCA-AATCGA---GTTCAAAAGGGTCAGAGCT 119
|||| |.||..|||| .|||.| ||.||| |||.||
BPUM_3613___c 85 AATTCAAGCGGATCACAGCCAGCATCTACAGGTACAA-------AGACCT 127
BSNT_05165___ 120 TG-TTGTATGGGAGGA--TAAAGAAAAGAGCATC----GGCATTAAAGAC 162
|| |.||.|||||.|| |.||.|| ||| ||.|||.|||||
BPUM_3613___c 128 TGCTAGTGTGGGAAGACGTCAAAAA------ATCTGATGGGATTCAAGAC 171
BSNT_05165___ 163 GCCGTTGCTGCGTTTGAAAAAGAGCATGATGTGAAGGTCAAAGTCGTTGA 212
||.||....|..||.||||||.|.|||||||||||..|||||||.||.||
BPUM_3613___c 172 GCTGTAAAAGAATTCGAAAAACAACATGATGTGAAAATCAAAGTGGTCGA 221
BSNT_05165___ 213 AAAACCGTATGCCAAGCAGATTGAAGATTTGCGAATGGACGGACCGGCCG 262
||||.|.||||||.|.||.|||||||.|.||||..|.||.|||.|.||.|
BPUM_3613___c 222 AAAAGCTTATGCCGATCAAATTGAAGCTCTGCGTCTAGATGGAGCAGCTG 271
BSNT_05165___ 263 GCACAGGCCCTGACGTGTTAACAATGCCAGGGGACCAAATCGGAACCGCT 312
|.|||||.||.|||||..|.||.|||||....||.|||||.|||.|.|||
BPUM_3613___c 272 GGACAGGTCCAGACGTCATCACGATGCCTCACGATCAAATTGGATCAGCT 321
BSNT_05165___ 313 GTCACGGAAGG---ATTACTCAAGGAATTACATG--------TCAAAAAA 351
|||||.||.|| ||||| ||||| ||| |||||||
BPUM_3613___c 322 GTCACTGAGGGGCTATTAC---AGGAA----ATGAAGCCAGATCAAAAA- 363
BSNT_05165___ 352 GACGTTCAATC-ACT--TTATACTGACGCTTCCATTCAGTCTCAAATGGT 398
|| .||| ||| || .||.||||..||.|||||.||.||||.|||
BPUM_3613___c 364 ---GT--GATCGACTCCTT-CACAGACGAATCGATTCAATCACAAACGGT 407
BSNT_05165___ 399 AGATCAAAAGCTTTATGGACTGCCAAAAGCGGTCGAAACGACTGTCCTTT 448
|||....|||||.|||||.||.||.|||.|.||.|||||.||.||.||||
BPUM_3613___c 408 AGACGGCAAGCTGTATGGTCTTCCTAAATCCGTTGAAACTACGGTGCTTT 457
BSNT_05165___ 449 TTTACAACAAAGATCTCATCTCCGAAAAGGAATTGCCCAA-AACGCTGGA 497
||||.||.|||||| ||...|.||||||.| |||| .||.||.||
BPUM_3613___c 458 TTTATAATAAAGAT---ATTGTCAAAAAGGCA----CCAACGACACTTGA 500
BSNT_05165___ 498 AGAGTGGTACGA-CTATTCCAAAAAGACTG-CTAATGGCAGCCAATTTGG 545
.|..|||||.|| || |||.|||||| ||| |.||.|.|.|..|.|..||
BPUM_3613___c 501 TGGCTGGTATGATCT-TTCGAAAAAG-CTGACAAAAGACGGAAAGTACGG 548
BSNT_05165___ 546 CTTTTTAGCCCTATTTGATCAAATTTATTATGCAGAAAGTGTGATGAGCG 595
||||.|.||...||..|||.|.|||||.||.|||.|||||||..|..|||
BPUM_3613___c 549 CTTTGTTGCAAAATGGGATGAGATTTACTACGCACAAAGTGTTTTAGGCG 598
BSNT_05165___ 596 GATATGGCGGATACATTTT----TGGAAAGGCCA--------AAGATGGG 633
|||.|||.||.||.||||| ..||||.||.| |.||||.|
BPUM_3613___c 599 GATCTGGGGGCTATATTTTCAAGCAGAAAAGCGACGGCTCTTATGATGTG 648
BSNT_05165___ 634 AGCTATAACCCGTCAGACATTGGAATTAATAATGAAGGAGCTGTCAAAGG 683
| || ||.|||||..|.||.||.||.||.||||||.||||
BPUM_3613___c 649 A---AT---------GATATTGGTTTGAACAACGATGGTGCTGTCCAAGG 686
BSNT_05165___ 684 TGCGGCGCTGA-------TTCAGAAGTTTTACAAAGATGGCCTGTTCCCG 726
|| || ||||.||.||.|..|..||.||.||.||||||
BPUM_3613___c 687 TG-------GAGAATATGTTCAAAAATTCTTTAGCGAAGGACTTTTCCCG 729
BSNT_05165___ 727 GCTGGCATTATTGGAGAACAAGGGATTAACGTATTGGAATCGCTGTTCAC 776
...|||||.|||||.||||||||.||.||.||..|..|.||..|.|||||
BPUM_3613___c 730 AAAGGCATCATTGGGGAACAAGGAATCAATGTCCTCAACTCCTTATTCAC 779
BSNT_05165___ 777 AGAAGGAAAA--GCCGCCGCAATTATCTCTGGGCCATGG----------A 814
||| ||||| |||||.||..|.||.|||||.|||||| .
BPUM_3613___c 780 AGA--GAAAAAGGCCGCTGCTGTCATTTCTGGTCCATGGTCATTCGGTCC 827
BSNT_05165___ 815 ATGTA--GAAGCTTTTTCAAAAGCAGGAATCAATTATGGCATTACGAAAC 862
||.|| |||||| ||.||..||||.||..|.||..|||
BPUM_3613___c 828 ATATAAGGAAGCT------------GGGATTGATTACGGTGTGACCGAAC 865
BSNT_05165___ 863 TGCCGAAGCTGGAAAATGGGAAAAACATGAGCTCCTTTATCGGCGTCAAA 912
||||.|..||....||.||.|||.|.||||||||.||..|.||.|||||.
BPUM_3613___c 866 TGCCAACACTCCCTAACGGAAAACATATGAGCTCATTCTTAGGTGTCAAG 915
BSNT_05165___ 913 AGCTACAACGT-TAGTGCATTTTCAAAGAATGAAGAGCTGGCGCAAGAAT 961
||||||||||| |..| |.|.|||.||.|||.||||.||.||..|..|||
BPUM_3613___c 916 AGCTACAACGTCTCCT-CTTATTCTAAAAATAAAGAACTTGCTGAGAAAT 964
BSNT_05165___ 962 TAGCCGTTTTTCTGGCAAATGAAAAAAATTCTAAAACACGATATGAAGAA 1011
|.|..|..|||.|..|.||.|||||||||.|.||.|..||.|.|||||..
BPUM_3613___c 965 TTGTTGAATTTATCACGAACGAAAAAAATGCGAAGAAGCGCTTTGAAGTG 1014
BSNT_05165___ 1012 ACGAAAGAAGTTCCTGCTGTGAAATCCCTAGCCAATGA-----CCCGGCT 1056
||..|.|||.||||..|.|||||| .|||..|||| ||.|.|
BPUM_3613___c 1015 ACAGAGGAAATTCCACCAGTGAAA----AAGCTGATGAAAGATCCAGTC- 1059
BSNT_05165___ 1057 ATTA-TGAAAA-GCGAGGCGGCACG----GGCTGTTACTGAACAATCCCG 1100
||.| .||||| ||.| ||| .||..||.|..|||||.|
BPUM_3613___c 1060 ATCACAGAAAATGCCA------ACGCAGATGCAATTTCAAAACAAAC--- 1100
BSNT_05165___ 1101 TTTCTCAGA-----GCCA-----ACCCCAAATATTCCGGAAATGAATGAA 1140
|| |||| ||.||.||.|.|||.||||||...|||
BPUM_3613___c 1101 -------GAAATATGCCACACTGACACCGAACAATCCTGAAATGGCAGAA 1143
BSNT_05165___ 1141 ATATGGACGCCGGCTGATTCAGCATTACAGACGG-----TTGCAACAGG- 1184
.|.||||..|||..||||...||.||| || |||||||.||
BPUM_3613___c 1144 GTGTGGAAACCGATTGATAGTGCTTTA-----GGACTCATTGCAACTGGT 1188
BSNT_05165___ 1185 -GAAGGCAGATCCGAAACAAGCATTGGATCAAGCAGCTGAAACGGCCAAA 1233
|.| |||||..||||.|.||.||.|||.|.|| |.|.|| .||||
BPUM_3613___c 1189 CGTA--CAGATGTGAAAAAGGCTTTTGATGATGC-GGTCAA----TCAAA 1231
BSNT_05165___ 1234 -GGA----CAAATTAAGGCAAAGCACAGCGGAAAATAA 1266
.|| ||||||||.|||||.|||..| ||||||
BPUM_3613___c 1232 TCGACTCTCAAATTAAAGCAAATCACTCC---AAATAA 1266
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.