Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05761 and BPUM_3611

See DNA alignment / Visit BSNT_05761 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:19
# Commandline: needle
#    -asequence pep-align/BSNT_05761___ywfK.1.24716.seq
#    -bsequence pep-align/BPUM_3611___ywfK.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05761___ywfK-BPUM_3611___ywfK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05761___ywfK-BPUM_3611___ywfK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05761___ywfK
# 2: BPUM_3611___ywfK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 299
# Identity:     173/299 (57.9%)
# Similarity:   226/299 (75.6%)
# Gaps:           0/299 ( 0.0%)
# Score: 941.0
# 
#
#=======================================

BSNT_05761___      1 MYYDVLKTFIAVVEEKNFTKAAEKLMISQPSVSLHIKNLEKEFQTALLNR     50
                     ||||.||||:.|||||||||||:||.||||||||||||||:||||.||||
BPUM_3611___y      1 MYYDALKTFVTVVEEKNFTKAAQKLRISQPSVSLHIKNLEQEFQTVLLNR     50

BSNT_05761___     51 SPKHFTTTPTGDILYQRAKQMVFLYEQAKAEIYAHHHYVKGELKIAASFT    100
                     |||..|.|||||:||.|:||::.||||||.:||.|||..:|:|.|.||||
BPUM_3611___y     51 SPKQLTVTPTGDMLYHRSKQIIRLYEQAKQDIYEHHHLARGKLTIGASFT    100

BSNT_05761___    101 IGEYILPPLLAQLQKLYPELNLDVMIGNTEEVSERVRMLQADIGLIEGHT    150
                     ||||:||.:||:..:|||.::::|:|.|||.::..||:...|||||||.|
BPUM_3611___y    101 IGEYVLPQILAEFHQLYPHVDIEVVIDNTEAIASHVRLFHVDIGLIEGQT    150

BSNT_05761___    151 NENELEIEPFMEDEMCIAAPNQHPLAGRKEISISDLQNEAWVTREKGSGT    200
                     |:.||.:|.|:|||:.|.||..||.|.:|:::|..||||.|:|||:||||
BPUM_3611___y    151 NDKELTVETFLEDELYIVAPLDHPFAKKKDVTIDQLQNETWITREEGSGT    200

BSNT_05761___    201 REYLDHVLSSNGLRPKSMFTISSNQGVKEAVINGMGLSVLSRSVLHKDLI    250
                     .|||.|||.||||:.::..|.||||.:|||||:||||||||:.||.:..|
BPUM_3611___y    201 GEYLQHVLKSNGLKARTFVTFSSNQAIKEAVIHGMGLSVLSKYVLQRGSI    250

BSNT_05761___    251 HREISILHIKDFSLKRKLSYIHSPLMENTKNKEIFITMLKSNYQSQLLK    299
                     ..|::::.::....|||.||:.||:....||||:.:.:|:...:....:
BPUM_3611___y    251 GGELAVISVRGMDFKRKFSYVESPMTGGNKNKELLVELLRKERKDASPQ    299


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