Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01678 and BPUM_3600
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:10
# Commandline: needle
# -asequence pep-align/BSNT_01678.1.24716.seq
# -bsequence pep-align/BPUM_3600___yhaZ.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01678-BPUM_3600___yhaZ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01678-BPUM_3600___yhaZ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01678
# 2: BPUM_3600___yhaZ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 372
# Identity: 105/372 (28.2%)
# Similarity: 139/372 (37.4%)
# Gaps: 184/372 (49.5%)
# Score: 535.0
#
#
#=======================================
BSNT_01678 0 -------------------------------------------------- 0
BPUM_3600___y 1 MWEADTIEPLKHVYNELFIKDLAEKFAQTSSEFDAEPFKRLVFQEDWEQL 50
BSNT_01678 0 -------------------------------------------------- 0
BPUM_3600___y 51 ELKGRMRRVTESMHACLPADYEKAMEILRQAAPYFSGLSALVFPDYVETY 100
BSNT_01678 0 -------------------------------------------------- 0
BPUM_3600___y 101 GLAHWDLSIKALEFFTPFSTSEFAVRPFLIQDQGKMLAQMLVWSQDQNEH 150
BSNT_01678 1 ---------------------MKSDPSPVLPILEKLMQDESLYVRKSVAN 29
:|.:||..|||||.|..|.|.||:|||||
BPUM_3600___y 151 IRRLASEGCRPRLPWGLSVPSLKKNPSVTLPILENLKADPSRYVQKSVAN 200
BSNT_01678 30 NLNDISKTHPHLLRKVADQWYGTHPHTDWIIKHAYRTLLKKGDKQALALF 79
:|||||...|.|:::....||||:.||:||:|||.||||||||...:|||
BPUM_3600___y 201 HLNDISAIQPDLMKQTVQNWYGTNEHTNWIVKHASRTLLKKGDPAIMALF 250
BSNT_01678 80 GYENADSIQLHDLTCQPKRIVIGESLEFSFSIHSDRDQKVRIEYAIDFVK 129
||.:..|:.:.||......|.|||.:.|.|::.:|:..|:|:|||||:||
BPUM_3600___y 251 GYGDHPSVHVTDLKIVQNPIQIGEKMTFHFTLQADKPLKLRVEYAIDYVK 300
BSNT_01678 130 ARGQRHQKVFKITE----TTMRKNETKSHTRIQSFKDLTTRKHYKGIHTL 175
|||.|:|||||||| ||:.:...:| |||:::||||||:|.|||
BPUM_3600___y 301 ARGTRNQKVFKITEFETDTTLHREFVRS----QSFQNMTTRKHYEGTHTL 346
BSNT_01678 176 SVIINGEVKDSLDFQVC----- 192
::||||..|.|:||:|.
BPUM_3600___y 347 TIIINGIPKASIDFEVTEDSNS 368
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