Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00895 and BPUM_3591
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:37
# Commandline: needle
# -asequence pep-align/BSNT_00895.1.24716.seq
# -bsequence pep-align/BPUM_3591___ydeG.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00895-BPUM_3591___ydeG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00895-BPUM_3591___ydeG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00895
# 2: BPUM_3591___ydeG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 423
# Identity: 233/423 (55.1%)
# Similarity: 282/423 (66.7%)
# Gaps: 99/423 (23.4%)
# Score: 1189.0
#
#
#=======================================
BSNT_00895 0 -------------------------------------------------- 0
BPUM_3591___y 1 MLDTEQNVMKNYIDSPQKLKKLFKRVLFVVSLSQIFGGAGIAAGITVGAL 50
BSNT_00895 1 -----------------------------------------------MIG 3
:.|
BPUM_3591___y 51 LAQQMLGTEAYAGVPIALFTLGSAGSAFIVGKLSQRYGRRIGLSAGFVAG 100
BSNT_00895 4 GLGAIGVIMAAIINSIFLLFIALLIYGAGTATNLQARYAGTDLANHKQRA 53
|||||||::||.:|.:.|||.:|.|||||||||||||||||||||.||||
BPUM_3591___y 101 GLGAIGVVIAATMNIVILLFASLFIYGAGTATNLQARYAGTDLANSKQRA 150
BSNT_00895 54 TAVSITMVFTTFGAVAGPSLVNVMGDFALSIGVPSLAGPFILAAAAYMLA 103
||:|:|||.|||||||||:||.:||:.|:|||||:|||||||:|||:::|
BPUM_3591___y 151 TAISMTMVMTTFGAVAGPNLVEMMGELAVSIGVPALAGPFILSAAAFIVA 200
BSNT_00895 104 GVVLFIMLRPDPLVIARTIEAANEEPGDKGHLAATEHTENKKGIIVGATV 153
|:||||:|||||||||:.|.....|.|......:.:...:.||:.|||||
BPUM_3591___y 201 GLVLFILLRPDPLVIAQKIAIYKAEHGHGNQRDSADQKIDSKGLTVGATV 250
BSNT_00895 154 MVLTQIVMVAIMTMTPVHMRHHGHDLGAVGLVIGFHIGAMYLPSLVTGVL 203
|:||||||||:||||||||:||||.|..||:|||||||||||||.:||||
BPUM_3591___y 251 MILTQIVMVALMTMTPVHMQHHGHGLAEVGIVIGFHIGAMYLPSPITGVL 300
BSNT_00895 204 VDRLGRTAMAISSGTTLLLAGVIAAFAPGDSMVLLVIALSLLGLGWNFGL 253
||:||||||:|:||.||||||::|||||.|||:||:||||||||||||||
BPUM_3591___y 301 VDKLGRTAMSIASGITLLLAGLLAAFAPSDSMILLIIALSLLGLGWNFGL 350
BSNT_00895 254 ISGTALIVDSTDSATRAKTQGTVDVLIALSGAAGGALSGMIVAGSSYLAL 303
|||||.|||||:.:||||||||:||.:||:||:||||||||||.:||.||
BPUM_3591___y 351 ISGTAQIVDSTEPSTRAKTQGTLDVFVALAGASGGALSGMIVANTSYAAL 400
BSNT_00895 304 SFTGGMLSLLLIPVVVW-FRGR- 324
|.:||:|||:||||:|| |:.:
BPUM_3591___y 401 SLSGGILSLILIPVIVWSFKSKT 423
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