Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03933 and BPUM_3590
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:25
# Commandline: needle
# -asequence pep-align/BSNT_03933.1.24716.seq
# -bsequence pep-align/BPUM_3590___yrhL.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03933-BPUM_3590___yrhL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03933-BPUM_3590___yrhL.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03933
# 2: BPUM_3590___yrhL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 643
# Identity: 184/643 (28.6%)
# Similarity: 247/643 (38.4%)
# Gaps: 283/643 (44.0%)
# Score: 921.0
#
#
#=======================================
BSNT_03933 0 -------------------------------------------------- 0
BPUM_3590___y 1 MNSKENRLRYILGLDGLRAIAVLAVIAYHLHIGPASGGFLGVDLFFVISG 50
BSNT_03933 0 -------------------------------------------------- 0
BPUM_3590___y 51 YLITTILLHKQDLGYQELLPFWMGRIRRLLPAAYVMIFLTVSWCAIAGSN 100
BSNT_03933 0 -------------------------------------------------- 0
BPUM_3590___y 101 ALLSIRGDALSSFFYVSNWWYIFHQLSYFDSFNAVSPLKNLWSLAIEEQF 150
BSNT_03933 0 -------------------------------------------------- 0
BPUM_3590___y 151 YIIWPVLLIAGLKWVKNRSHLPLITFGLALVSALWMAILYSPDMDPSRVY 200
BSNT_03933 1 -------------------------------------MHATEFSAFCILV 13
:|...|..|.:.:
BPUM_3590___y 201 YGTDTRAFALLIGCSLAFVWPMQRLSSKKLLPVGRRILHIAGFGTFAVFL 250
BSNT_03933 14 LCVYFTDEYEPFLYRGGMLFISVTAAILIACVCHPSSFLGNLLSWRPLRW 63
||||..||::.|||:||||...:.|||||||:|||:|.||..||::||.|
BPUM_3590___y 251 LCVYAVDEFDGFLYQGGMLLFCLNAAILIACICHPASLLGKWLSYQPLVW 300
BSNT_03933 64 LGARSYGIYLWHYPVIVLSTPVQEIGNPVFWHIVLKVIVTCILAELSYLF 113
||.|||||||||||:|||:|||.|||.|....:.|::|...::||.||.|
BPUM_3590___y 301 LGKRSYGIYLWHYPIIVLTTPVIEIGQPSMGRVALQIIAILLIAEASYRF 350
BSNT_03933 114 IEKPVRTQGFRPFFRRVLIHR--IKEWKTTSVISKMSIGFIIFAILIFAG 161
||:|:|..||:.:|....|.: .|:|.|: .|:.:|.....|::|..
BPUM_3590___y 351 IEQPIRRLGFKQYFASWSIWKKGYKQWSTS---HKVFLGITAALIILFTI 397
BSNT_03933 162 GLSGLAGEQKHPTKWTYSSQETNADTSQASGDKKNAAADKKHNPEQKTTD 211
|:| ||..|:....:.:..| ...:|..|
BPUM_3590___y 398 GMS--------------SSSHTSPHAKEVTQIK---------TAPKKAGD 424
BSNT_03933 212 SIQGQKENKDSGQETHKKKDTQSQQTKEPADTAKEVLAIGDSVMLDISSH 261
|.:.:.:.| :|.|:||....:| ..::|||||||||||:.:
BPUM_3590___y 425 STESKTKKK---KEKHEKKTADQKQ-------FHQILAIGDSVMLDIAPN 464
BSNT_03933 262 LRQSLSHVTIDGKVGRQMSQALELAREYKSFNQPNKAVIIELGTNGYFTN 311
|.::.:.:|||.||||||::|:.:|.:|.||||.|.|||||||||||||.
BPUM_3590___y 465 LEKTYAQITIDAKVGRQMNEAVSIAPQYASFNQSNAAVIIELGTNGYFTE 514
BSNT_03933 312 SQIEQLLQSFSKAHIYLVNTRVPRQWESKVNESLQQQAHAHQNVTLVDWH 361
..:...:|.||||||:||||||||.||:.||..:|:.|..|.||||||||
BPUM_3590___y 515 GTLTAFIQQFSKAHIFLVNTRVPRSWENDVNAVIQRVADQHANVTLVDWH 564
BSNT_03933 362 TEALQHPEYFTPDGVHLVPKGAKTLTALIVQAMKS-------- 396
:.|...|.||.||||||..||:.|||.||..::|.
BPUM_3590___y 565 SAATGQPSYFQPDGVHLSTKGSDTLTQLITASIKKKGDVSSSS 607
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