Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_06049 and BPUM_3588

See DNA alignment / Visit BSNT_06049 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:36
# Commandline: needle
#    -asequence pep-align/BSNT_06049___deoR.1.24716.seq
#    -bsequence pep-align/BPUM_3588___deoR.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06049___deoR-BPUM_3588___deoR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06049___deoR-BPUM_3588___deoR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06049___deoR
# 2: BPUM_3588___deoR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 314
# Identity:     261/314 (83.1%)
# Similarity:   284/314 (90.4%)
# Gaps:           1/314 ( 0.3%)
# Score: 1321.0
# 
#
#=======================================

BSNT_06049___      1 MDREKQQLSIEAARLYYQSDYSQQQIAEQLNISRPTVSRLLQYAKEKGYV     50
                     |||||||||||||||||.||||||:||:||::||||||||||||||||||
BPUM_3588___d      1 MDREKQQLSIEAARLYYLSDYSQQEIAKQLDLSRPTVSRLLQYAKEKGYV     50

BSNT_06049___     51 QIRVMDPFEDLDALGSILEEKYGLLEAHVVFSPTPDYAGITHDLSRYGAE    100
                     ||.||||||||:.|.|:|:|||.||||||||||..||..||..||::|||
BPUM_3588___d     51 QITVMDPFEDLNELSSLLKEKYDLLEAHVVFSPKDDYPTITEYLSQFGAE    100

BSNT_06049___    101 YMHETVKDGDIVGVSWGTTMYQIAQNMQPKQVKGVEVVQLKGGISHSRVS    150
                     |:..|||||||||||||||||||||.|||||||||||||||||||||.|:
BPUM_3588___d    101 YLQNTVKDGDIVGVSWGTTMYQIAQKMQPKQVKGVEVVQLKGGISHSHVN    150

BSNT_06049___    151 TYSAETIQLFAEAFQTMPRYLPLPVVFDNADVKRMVEKDRHIERIIEMGK    200
                     ||||||||||||||||.|||||||||||:|.||.|||:||||:|||||||
BPUM_3588___d    151 TYSAETIQLFAEAFQTAPRYLPLPVVFDSAAVKEMVEQDRHIQRIIEMGK    200

BSNT_06049___    201 QANIALFTVGTVRDEALLFRLGYFNEEEKALLKKQAVGDICSRFFDAKGN    250
                     |||||:||||||||||||||||||.||||||||..:||||||||:|.:|.
BPUM_3588___d    201 QANIAVFTVGTVRDEALLFRLGYFREEEKALLKASSVGDICSRFYDQEGR    250

BSNT_06049___    251 ICSSAINDRTIGVELEDLRLKERSILVAGGSRKVSSIHGALTGKYANVLI    300
                     |||.|||:|||||||:|||.||||||||||.|||:||||||.||||||||
BPUM_3588___d    251 ICSEAINNRTIGVELDDLRTKERSILVAGGHRKVASIHGALRGKYANVLI    300

BSNT_06049___    301 IDQHTARALVNDL-    313
                     ||||||:||:|.. 
BPUM_3588___d    301 IDQHTAKALLNVTK    314


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