Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06049 and BPUM_3588
See
Amino acid alignment /
Visit
BSNT_06049 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:36
# Commandline: needle
# -asequence dna-align/BSNT_06049___deoR.1.24716.seq
# -bsequence dna-align/BPUM_3588___deoR.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06049___deoR-BPUM_3588___deoR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06049___deoR-BPUM_3588___deoR.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06049___deoR
# 2: BPUM_3588___deoR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 959
# Identity: 700/959 (73.0%)
# Similarity: 700/959 (73.0%)
# Gaps: 31/959 ( 3.2%)
# Score: 2412.5
#
#
#=======================================
BSNT_06049___ 1 ATGGATCGGGAAAAACAACAATTAAGCATAGAAGCGGCAAGGCTTTACTA 50
|||||||||||.|||||||||.|.||.||.||||||||||||||.||.||
BPUM_3588___d 1 ATGGATCGGGAGAAACAACAACTGAGTATTGAAGCGGCAAGGCTATATTA 50
BSNT_06049___ 51 TCAGTCTGACTACAGTCAGCAGCAAATTGCTGAGCAGCTCAACATTTCAA 100
|...||.||.|||||.||||||.|||||||..|.||||||.||.|.||.|
BPUM_3588___d 51 TTTATCGGATTACAGCCAGCAGGAAATTGCCAAACAGCTCGACCTGTCGA 100
BSNT_06049___ 101 GGCCAACCGTTTCCCGGCTGCTGCAATATGCAAAGGAAAAAGGGTATGTC 150
|.|||||.||.||.||||||||.||||||||.|||||.||.|||||.|||
BPUM_3588___d 101 GACCAACTGTATCTCGGCTGCTTCAATATGCGAAGGAGAAGGGGTACGTC 150
BSNT_06049___ 151 CAGAT-TCGCGTCATGGACCCTTTTGAGGATTTGGATGCGCTCGGTTCCA 199
||||| .|| ||.||||||||.|||||.||.||..|||.|||...|||..
BPUM_3588___d 151 CAGATAACG-GTAATGGACCCGTTTGAAGACTTAAATGAGCTTTCTTCGT 199
BSNT_06049___ 200 TACTTGAAGAGAAATACGGGCTCCTTGAGGCGCATGTTGTGTTTTCCCCG 249
|.||..|.||.|||||.|..||.||.||.||.|||||.||||||||.||.
BPUM_3588___d 200 TGCTCAAGGAAAAATATGACCTGCTCGAAGCTCATGTGGTGTTTTCGCCC 249
BSNT_06049___ 250 ACACCCGATTATGC-AGGAATTACACATGACCTAAGCCGCTATGGTGCAG 298
|.|...||||||.| |.| ||.||..|..||.|.||||..|.||||||.|
BPUM_3588___d 250 AAAGATGATTATCCTACG-ATCACCGAATACTTGAGCCAATTTGGTGCTG 298
BSNT_06049___ 299 AATATATGCATGAAACGGTAAAAGACGGCGACATTGTCGGCGTCAGCTGG 348
|.||..||||..|.||.|||||||||||.||.||.||.||.||.||||||
BPUM_3588___d 299 AGTACTTGCAAAACACAGTAAAAGACGGTGATATCGTTGGTGTGAGCTGG 348
BSNT_06049___ 349 GGAACTACCATGTATCAAATCGCGCAAAACATGCAGCCGAAGCAAGTAAA 398
|||||.||.|||||||||||.||.|||||.|||||.||.||.||.||.||
BPUM_3588___d 349 GGAACCACTATGTATCAAATTGCTCAAAAGATGCAACCTAAACAGGTCAA 398
BSNT_06049___ 399 AGGCGTCGAGGTCGTCCAACTGAAAGGCGGCATCAGCCATTCCCGGGTAA 448
|||.||.|||||.|||||.|||||.||.||.||.|||||.||||..||.|
BPUM_3588___d 399 AGGTGTAGAGGTTGTCCAGCTGAAGGGTGGGATTAGCCACTCCCATGTGA 448
BSNT_06049___ 449 GCACGTATTCGGCTGAAACGATTCAGCTGTTTGCGGAGGCTTTTCAAACG 498
..||.|||||.||.|||||.||.|||||||||||.|||||.||||||||.
BPUM_3588___d 449 ATACATATTCTGCGGAAACCATCCAGCTGTTTGCCGAGGCCTTTCAAACA 498
BSNT_06049___ 499 ATGCCGCGCTATCTCCCGCTTCCCGTCGTGTTTGATAATGCGGATGTGAA 548
...|||||||||.|.||||||||.||.||.|||||||.|||.|..||.||
BPUM_3588___d 499 GCACCGCGCTATTTGCCGCTTCCTGTTGTATTTGATAGTGCTGCCGTCAA 548
BSNT_06049___ 549 GCGA-ATGGTGGAGAAAGACCGTCATATTGAGCGGATCATCGAGATGGGA 597
.|| |||||.||..|.|||.|.||||||.||||.|||||.||.|||||.
BPUM_3588___d 549 -AGAGATGGTTGAACAGGACAGACATATTCAGCGCATCATTGAAATGGGC 597
BSNT_06049___ 598 AAGCAGGCGAATATCGCTCTCTTCACGGTGGGGACCGTTCGTGACGAAGC 647
||.|||||||||||.|||.|.|||||.||.||.||.||..|.||.|||||
BPUM_3588___d 598 AAACAGGCGAATATTGCTGTGTTCACTGTTGGAACGGTAAGAGATGAAGC 647
BSNT_06049___ 648 GCTGCTGTTCCGGCTCGGATATTTTAACGAAGAAGAGAAAGCCCTGCTGA 697
.||..||||..|.||.||.||.||...|||||||||.|||||.|||||.|
BPUM_3588___d 648 CCTTTTGTTTAGACTTGGTTACTTCCGCGAAGAAGAAAAAGCACTGCTCA 697
BSNT_06049___ 698 AA--AAACAGGCCGTGGGTGATATTTGTTCACGCTTTTTTGATGCGA-AA 744
|| |..||| |||.||.||.||.||.||.|||||||.|||| |.| ||
BPUM_3588___d 698 AAGCATCCAG--CGTCGGAGACATCTGCTCGCGCTTTTATGAT-CAAGAA 744
BSNT_06049___ 745 GGGAATATTTGCA--GCAGCGCCATCAATGACCGGACCATCGGTGTTGAG 792
||....||||||| |.|||| ||.||..||||.||.||.||.||.|||
BPUM_3588___d 745 GGCCGCATTTGCAGTGAAGCG--ATTAACAACCGTACGATTGGCGTGGAG 792
BSNT_06049___ 793 CTTGAAGACCTCA-GACTGAAGGAACGCTCCATTTTAGTTGCCGGCGGAA 841
|||||.||..|.| ||| .||.|||||.||.|||.|.|||||.||||||
BPUM_3588___d 793 CTTGATGATTTAAGGAC-AAAAGAACGTTCTATTCTTGTTGCTGGCGGA- 840
BSNT_06049___ 842 GCA--GAAAAGTATCTTCCATTCACGGAGCATTAACCGGAAAATATGCCA 889
|| |.||.|||.||||.||.|||||.|||.|||..|||||||||||.|
BPUM_3588___d 841 -CATCGCAAGGTAGCTTCTATCCACGGGGCACTAAGAGGAAAATATGCGA 889
BSNT_06049___ 890 ACGTTTTAATCATTGACCAGCATACCGCGAGGGCGCTTGTTAATG----- 934
||||.||.||.|||||.||||||||.||.|.|||.|||.|.||||
BPUM_3588___d 890 ACGTCTTGATTATTGATCAGCATACAGCAAAGGCTCTTTTAAATGTCACA 939
BSNT_06049___ 935 -ATTTGTGA 942
|.|.|
BPUM_3588___d 940 AAATAG--- 945
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.