Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02226 and BPUM_3573
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:41
# Commandline: needle
# -asequence pep-align/BSNT_02226___ykoE.1.24716.seq
# -bsequence pep-align/BPUM_3573___ykoE.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02226___ykoE-BPUM_3573___ykoE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02226___ykoE-BPUM_3573___ykoE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02226___ykoE
# 2: BPUM_3573___ykoE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 203
# Identity: 79/203 (38.9%)
# Similarity: 121/203 (59.6%)
# Gaps: 8/203 ( 3.9%)
# Score: 385.0
#
#
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BSNT_02226___ 1 MKSWKVKEIVIMSVISIVFAVVYLLFTHFGNVLAGMFGPIAYEPIYGIWF 50
.:||:||:|:..::|:...|:||.::.....:..:.||.....::|||.
BPUM_3573___y 1 -MTWKMKEVVLAVILSVACGVIYLGWSTLYLPITALVGPAGGNIMFGIWV 49
BSNT_02226___ 51 IVSVIAAYMIRKPGAALVSEIIAALVECLLGNPSGPMVIVIGIVQGLGAE 100
|.|.|.||:|:||||||::|..||.||.|.|:..|...::||:.||||||
BPUM_3573___y 50 IASPIVAYIIQKPGAALIAETAAAAVELLTGSHFGLSALLIGVCQGLGAE 99
BSNT_02226___ 101 AVFLATRWKAYSLPVLMLAGMGSSVASFIYDLFVSGYAAYSPGYLLIMLV 150
..|....:|.|.:..|||:|..::|.:..|.|..:|:..|:|..|||.|:
BPUM_3573___y 100 IAFALFGYKRYRMWTLMLSGAFAAVGAMAYSLVANGFGYYTPQVLLITLI 149
BSNT_02226___ 151 IRLISGALLAGLLGKAVSDSLAYTGVLNGMALGKELKKKRKRASEHASL- 199
.::|||.:|.|.|.|.|.|:|..|||||..|: :|:||.:..:|..:
BPUM_3573___y 150 TQIISGMILGGCLAKVVVDTLCKTGVLNQYAI---MKEKRNKGEQHEFIS 196
BSNT_02226___ 199 --- 199
BPUM_3573___y 197 RVQ 199
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