Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02224 and BPUM_3572
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:41
# Commandline: needle
# -asequence pep-align/BSNT_02224.1.24716.seq
# -bsequence pep-align/BPUM_3572.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02224-BPUM_3572.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02224-BPUM_3572.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02224
# 2: BPUM_3572
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 565
# Identity: 220/565 (38.9%)
# Similarity: 321/565 (56.8%)
# Gaps: 51/565 ( 9.0%)
# Score: 1009.5
#
#
#=======================================
BSNT_02224 1 MQAFDELLKVDELSFSYEEDEKPVFQDISFELQKGECVLLLGPSGCGKSS 50
.:..|..:.|:..:.|..:||...:|..:||||.||:|||||.|||:
BPUM_3572 1 ---MNSFLACNNLTVRFYEQPQPVLHQVSLSIQKGEKVLILGPSGSGKST 47
BSNT_02224 51 LALCLNGLYPEACDGIQSGHVFLFQKPVTDAETSQTIAQHAGVVFQDPDQ 100
|...|.|:.||..:....|.|.| .:|.||:|||||.
BPUM_3572 48 LISVLAGIIPEHLEADMQGEVIL--------------QRHTGVMFQDPDS 83
BSNT_02224 101 QFCMLTVEDEIAFGLENLQIPKEEMTEKINTVLEKLRITHLKEKTISTLS 150
||||..|.:||||.|||..:|::||.:.|..:::|:::.......|.|||
BPUM_3572 84 QFCMHRVNEEIAFSLENRSVPRDEMDDIIQQLMQKVQLEVDPNTDIHTLS 133
BSNT_02224 151 GGQKQKVALACILAMEPELIILDEPTSLLDPFSAREFVHLMKDLQREKGF 200
||.||::||||:||:||:::..||||:.|||....|...|::.|..::..
BPUM_3572 134 GGMKQRLALACLLALEPDVLFFDEPTAQLDPAGRMEIFRLLQQLAADQRQ 183
BSNT_02224 201 SLLVIEHQLDEWAPWIERTIVLDKSGKKALDGLTKNLFQHEAETLKKLGI 250
:::.:||.||....|::|.|:||..|....||..|::.....:.:|:.||
BPUM_3572 184 TMIFVEHVLDGVIEWMDRVILLDDQGSILADGSPKDVLTTYEKEMKEAGI 233
BSNT_02224 251 TIPKVCHLQEKLSMPFTLSKKMLFKEPI-PPGH-------AKKKE----- 287
..||: ..||.| .:.::|. |..| |:|::
BPUM_3572 234 WRPKL--FPEKWS--------TILQDPFHPMSHTFMQTFEARKEQHKQVP 273
BSNT_02224 288 APSGESVLEVSSLSFARGQQTIFKDISFSLRGGSLTALVGPNGTGKSTLL 337
|...|:::....|..:.|::.|..|:...::.|...|::|.||:||||.|
BPUM_3572 274 ATERETIMRSEDLQLSYGKKRIMSDLQLDIKTGDWVAIIGENGSGKSTCL 323
BSNT_02224 338 SVLARLMKPQSGKILLYDQPLQKYKEKELRKRMGFVFQNPEHQFVTDTVY 387
..|.||...:.|.|.|.|..|:|:.::||.::.||||||||.||:.|||:
BPUM_3572 324 KHLVRLESTKKGHIFLKDTLLKKWSDRELYEKAGFVFQNPELQFIQDTVF 373
BSNT_02224 388 DELLFGQK-----ANAETEKKAQHLLQRFGLAHLADHHPFAISQGQKRRL 432
||:.||.: .|...||..| ||:.|||...|..|||.:|.||||||
BPUM_3572 374 DEIAFGGRQRNWPENVVQEKTIQ-LLKEFGLEKHAKAHPFTLSLGQKRRL 422
BSNT_02224 433 SVATMLMHDVKVLLLDEPTFGQDARTAAECMEMIQRIKAEGTAVLMITHD 482
||||||:.|..||||||||||||.|||.|.:..::..:.:||.:||:|||
BPUM_3572 423 SVATMLLFDQDVLLLDEPTFGQDERTAKELIRRLKERQRQGTTILMVTHD 472
BSNT_02224 483 MELVSSYADSVLVLHDTGLAFDGSPAQLFSQETGLVQKAKLTLPLLYKWM 532
|:||...|:.||:.|.....::|:|..|||.:. ||...:|..||.|::|
BPUM_3572 473 MDLVDECANQVLLFHQGKHVYEGTPYDLFSNQE-LVNAYQLRAPLHYQYM 521
BSNT_02224 533 AYQEEVRDEAAVTSH 547
..:::|...|.
BPUM_3572 522 TERKDVLTIAK---- 532
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