Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01361 and BPUM_3558

See DNA alignment / Visit BSNT_01361 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:57
# Commandline: needle
#    -asequence pep-align/BSNT_01361___yfiA.1.24716.seq
#    -bsequence pep-align/BPUM_3558.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01361___yfiA-BPUM_3558.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01361___yfiA-BPUM_3558.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01361___yfiA
# 2: BPUM_3558
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 290
# Identity:      65/290 (22.4%)
# Similarity:   114/290 (39.3%)
# Gaps:          40/290 (13.8%)
# Score: 180.0
# 
#
#=======================================

BSNT_01361___      1 --MQLEELINQH----YSKLNDNDFHILKYILNHKHTCYHLGIDALAKAC     44
                       ..:||.|..|    :..|:.....|..|||.:........|.|||..|
BPUM_3558          1 MVFIIEENIFSHIRTTFHSLSPTQKKIANYILENPQKVVLHSISALASEC     50

BSNT_01361___     45 SVSRSSILRLAQKLGFSGYSEFRVFLKWEDQPEEGESMSFQKLLDDIEAN     94
                     :.|.::|.|..:|:|:..|..|||.:..:......:|:..:....|..|:
BPUM_3558         51 NTSETTIFRFLRKIGYESYQVFRVHVAQDIATNTPQSIYGEIEASDSVAD    100

BSNT_01361___     95 LKF----LRTKDMTDMCQLID------------EADRIFVYGSGNAQKIC    128
                     :|.    |.|..:.||..:::            :|.:...:|:| |....
BPUM_3558        101 IKHKVIELTTNSIQDMKHIVEDHAVTQFIEQMKQAHKTVFFGAG-ASSFI    149

BSNT_01361___    129 ARDLQRMFIPRHRYLILIEDTNEFNLMRDDFKVNDLFIIISLSGETPELI    178
                     |.|....|:.....:.|..|.:..|::......:|..:.||.|||:.|::
BPUM_3558        150 AGDAYHKFLQLGFDVSLCSDPHMMNMIATHATEHDFIVAISHSGESREIL    199

BSNT_01361___    179 PQARMLSAKGIPFISITNLKNNVLAQLTPHNLYATSKPVTLSDKTEIVAF    228
                     ...:....||....|||:...:.||:.:..:|.::|:..|....:.|...
BPUM_3558        200 DAVQFAKEKGAKIASITSYPKSELAKRSDFHLLSSSRETTYRSDSMISRI    249

BSNT_01361___    229 APFFLVGEALFRAYVDYKEAEKNDNE--------------    254
                     ....:: :.|:.|.|  .|...|..|              
BPUM_3558        250 NQLVII-DVLYVAAV--LELGSNAIENVKRSRLAVAKNKT    286


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