Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05975 and BPUM_3557
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:31
# Commandline: needle
# -asequence pep-align/BSNT_05975.1.24716.seq
# -bsequence pep-align/BPUM_3557.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05975-BPUM_3557.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05975-BPUM_3557.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05975
# 2: BPUM_3557
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 236
# Identity: 101/236 (42.8%)
# Similarity: 133/236 (56.4%)
# Gaps: 19/236 ( 8.1%)
# Score: 435.0
#
#
#=======================================
BSNT_05975 1 -------MKWNKMLKAAGIAVLFFS-VLAYAAP--SLKAVQAKTPTVSTH 40
|| |...|::|.|| :::..|| |..|.|||...||||
BPUM_3557 1 MGVFTMTMK-----KGLTISLLIFSLIVSLFAPVGSADAKQAKKAKVSTH 45
BSNT_05975 41 TYKKIKELTYPQVHHIGNAAFEKKINQELKAYIEQSYQEYLKNKKAGEQQ 90
.|||.|...|.||.::..|.. |.||::||..|..||..||..|...::.
BPUM_3557 46 YYKKKKTFKYAQVKNLSKAHM-KTINRDLKEDIAFSYSTYLYLKDEAKKD 94
BSNT_05975 91 GF-KTEYRTSFSVKYNAAGKLSIQTLNYIYSGGAHGLTSVQSFNYDL--K 137
|| |..|..||..|:|...||||...:|:..||.||.|.|.|.||.| |
BPUM_3557 95 GFGKITYERSFKTKFNNGKKLSILNYDYMNDGGMHGDTMVSSMNYVLTKK 144
BSNT_05975 138 AQKRVTLEQILSTKTKVSKTRDYLYSYIKKHDELFFPDVKKEDITLNKDT 187
..|:|.|..::.||.|.:|.|||:|:|.|||...|:.::||.||.:|.:|
BPUM_3557 145 KTKQVFLTDVVKTKKKRTKVRDYIYNYTKKHKSKFYANLKKRDIEINYNT 194
BSNT_05975 188 MFYFTANGIAIVFGQYDLGPYAAGIRDVQVPASIYQ 223
.:|||..|||:||..|::.||..||..:||||.:|:
BPUM_3557 195 QYYFTKKGIAVVFQPYEISPYYVGIPVIQVPAKVYK 230
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