Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01359 and BPUM_3554

See DNA alignment / Visit BSNT_01359 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:57
# Commandline: needle
#    -asequence pep-align/BSNT_01359___yfjA.1.24716.seq
#    -bsequence pep-align/BPUM_3554___yfjA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01359___yfjA-BPUM_3554___yfjA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01359___yfjA-BPUM_3554___yfjA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01359___yfjA
# 2: BPUM_3554___yfjA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 110
# Identity:      71/110 (64.5%)
# Similarity:    84/110 (76.4%)
# Gaps:           6/110 ( 5.5%)
# Score: 357.0
# 
#
#=======================================

BSNT_01359___      1 ---MDSYKVIELANKYSAAAEEVRSSKMLLESRLSALGDAWQGKARDSFD     47
                        :||.:.:.||.|:..||||:|.||.|||:||.|:|..|||:||:.||
BPUM_3554___y      1 MRKLDSSQTLALAQKFQEAAEEIRQSKQLLENRLKAVGSGWQGEARNKFD     50

BSNT_01359___     48 QDFEETKAAYDQFEQELLETSQELKAAAVKIEERKAEIARMEELERKARE     97
                     |.||||.|.|||||::||||||||:.|||||||||||||||||||||.||
BPUM_3554___y     51 QSFEETTARYDQFEKDLLETSQELRDAAVKIEERKAEIARMEELERKRRE    100

BSNT_01359___     98 ERHKLGR---    104
                     ||.:..|   
BPUM_3554___y    101 ERRERNREGR    110


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