Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01358 and BPUM_3553
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:57
# Commandline: needle
# -asequence pep-align/BSNT_01358___yfjB.1.24716.seq
# -bsequence pep-align/BPUM_3553___yfjB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01358___yfjB-BPUM_3553___yfjB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01358___yfjB-BPUM_3553___yfjB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01358___yfjB
# 2: BPUM_3553___yfjB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 410
# Identity: 251/410 (61.2%)
# Similarity: 322/410 (78.5%)
# Gaps: 15/410 ( 3.7%)
# Score: 1290.5
#
#
#=======================================
BSNT_01358___ 1 MSGNIAVDPDKLEQLANDVVTELTDMENKYKDLHVELGQMILQCDPRYSS 50
|:.:|.||||:|..||||||.||:.:|.|::|||.||..:||.|||||.|
BPUM_3553___y 1 MARDIVVDPDQLTGLANDVVGELSAIETKHRDLHSELDGLILGCDPRYRS 50
BSNT_01358___ 51 CFSGVGDAWSSGKALVTKLSDNEIFIRKTGDKFVEQDDILRKLYNAYDKY 100
|||||||||.:|:||::|||.::|.||...||.||.||||||||:.||:|
BPUM_3553___y 51 CFSGVGDAWGAGQALISKLSSDDIAIRHAKDKMVEADDILRKLYSIYDQY 100
BSNT_01358___ 101 GTMTSLTALMLTQGKYYGLGLTKFVKQPSGLHTAQHSKLLLDISRAVDSS 150
||:|||..:::.|.||||||:|.|:|: :|.:.|||||||||::..|:.:
BPUM_3553___y 101 GTLTSLAGIVMMQAKYYGLGMTTFIKE-NGRYAAQHSKLLLDLTSRVEGT 149
BSNT_01358___ 151 RYQKAARVLLNPKYLLKKTNRPFSDLVHKKFTKYFPQDTVDFSNSVRSYT 200
|:.:.||:.|:.|.|||::|...:|||||||||::|.|||.|:||||.:|
BPUM_3553___y 150 RFDRLARIWLSNKELLKRSNWSMADLVHKKFTKFYPDDTVAFTNSVRDFT 199
BSNT_01358___ 201 KGFLN---EAGVRSTLKDVGKTGLRFAKGNAITATLITGATETFGAGVKI 247
||.:| .|.::|.||: |.||||||||.:|::||||||.|.|:||
BPUM_3553___y 200 KGSINWKDTAAIKSVLKN----GSRFAKGNAIISTVVTGATETVGCGLKI 245
BSNT_01358___ 248 AENYAKYQDKPEVLKRENAKAVGNAVNNTIFIAGGATAGAVIGGAIGSFA 297
|||||::.|:|||||||||||||||||||:|||||:.||||:|||:||||
BPUM_3553___y 246 AENYAEFGDQPEVLKRENAKAVGNAVNNTVFIAGGSVAGAVVGGALGSFA 295
BSNT_01358___ 298 GPVGTVLLGAAGSYIGGVVGEQIAKYTAGFAEKAALKLKEPIHAVVDTAK 347
||:|||:.||.||.:||.:||::||.|:||||:.|:|||:|||||||..:
BPUM_3553___y 296 GPIGTVVGGAIGSAVGGFIGEKVAKLTSGFAEQVAVKLKDPIHAVVDKGR 345
BSNT_01358___ 348 KGLESAGKVVKSVNDGIDAANKSIHKGIDSAKKGMEKAKKTADSLIHGAT 397
:..|.||:.||:|||.||.||:.||||| ||.|:||||||.||.
BPUM_3553___y 346 QAFELAGQGVKAVNDTIDQANQVIHKGI-------EKTKETADSLIKGAG 388
BSNT_01358___ 398 HFLKGKFSFG 407
.|.||.||||
BPUM_3553___y 389 DFFKGAFSFG 398
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