Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01357 and BPUM_3552

See DNA alignment / Visit BSNT_01357 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:57
# Commandline: needle
#    -asequence pep-align/BSNT_01357___yfjC.1.24716.seq
#    -bsequence pep-align/BPUM_3552___yfjC.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01357___yfjC-BPUM_3552___yfjC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01357___yfjC-BPUM_3552___yfjC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01357___yfjC
# 2: BPUM_3552___yfjC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 255
# Identity:     121/255 (47.5%)
# Similarity:   173/255 (67.8%)
# Gaps:           3/255 ( 1.2%)
# Score: 639.0
# 
#
#=======================================

BSNT_01357___      1 MKQFTISIEELLFCFYSEGFFEQGMALKQAYFPEIEDEQLGALFEAACRS     50
                     |.|.::|||||:|.|||||:|||||:||:||:|::|||:||.|||.||||
BPUM_3552___y      1 MDQLSLSIEELIFSFYSEGYFEQGMSLKEAYYPDVEDERLGFLFEIACRS     50

BSNT_01357___     51 LLAKDAAEYRNHQYRLKDEYCPFIHVLNDADYTVKLSKFNGQGAEQNVSC    100
                     ||||...|::|.|||.|.||..||..:|||.:|:|.|:|..:..|.:.|.
BPUM_3552___y     51 LLAKGVLEFQNRQYRYKAEYRHFIQAMNDASHTIKASRFGDKDEEISTSF    100

BSNT_01357___    101 HVSKFGTYSHELLFDEQVHRITKMESSEGLLAKTDEFLHIIDTEDKRESI    150
                     |.::.|.|:|..|:|:|||:|.|::..:....:...|.: |...|..||:
BPUM_3552___y    101 HTTQMGVYAHHTLYDQQVHQIQKLKDDQQAEEQVTAFFN-IQMSDHPESV    149

BSNT_01357___    151 VTLTSNEFEKLLEGASDNPSYLKEFLEKHDHQEDVTRFANDLAMRKGKMD    200
                     :||.:.|||||||.||:.......||.:.:::|.|..|.:|:..||||||
BPUM_3552___y    150 MTLQAEEFEKLLEQASEAKKEWPSFLPRAENEELVQSFVSDVQTRKGKMD    199

BSNT_01357___    201 TLMRLAYGKDNTPEVADMAFVLPGAHHTWLVTGITQNEFSILPAHKDVVN    250
                     :||::.|.|:|||:|..|.||:||...:|||:||.::||.:..||:|.:.
BPUM_3552___y    200 SLMKVVYDKNNTPDVESMLFVIPGEKQSWLVSGIKESEFRVETAHRDGLR    249

BSNT_01357___    251 QIISK    255
                     .|.  
BPUM_3552___y    250 SIF--    252


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