Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03509 and BPUM_3549

See DNA alignment / Visit BSNT_03509 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:02
# Commandline: needle
#    -asequence pep-align/BSNT_03509___ansR.1.24716.seq
#    -bsequence pep-align/BPUM_3549___ansR.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03509___ansR-BPUM_3549___ansR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03509___ansR-BPUM_3549___ansR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03509___ansR
# 2: BPUM_3549___ansR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 120
# Identity:      71/120 (59.2%)
# Similarity:    86/120 (71.7%)
# Gaps:           9/120 ( 7.5%)
# Score: 321.0
# 
#
#=======================================

BSNT_03509___      1 MNLDRLTELRKKKNWSLQYTADLLGIAKSTYAGYESGYRRPSLEALAMLA     50
                     |.|||||.|||||.||||:|||.||||||||||||||||||||||:..||
BPUM_3549___a      1 MILDRLTTLRKKKKWSLQHTADRLGIAKSTYAGYESGYRRPSLEAVKRLA     50

BSNT_03509___     51 DLFDTTCDELLGR----EKQKQTAPQAIELATWSSLDFTISVDGQPLSED     96
                     ||:||:.|.||||    |.|::.:...|||.  .:.:.||.|||.||:::
BPUM_3549___a     51 DLYDTSIDFLLGRTDEPEIQRKISDIKIELT--EAKEGTILVDGVPLNDE     98

BSNT_03509___     97 EIIQLITFIRTKRKVQEELS    116
                     ||.||:.|||.|..::.   
BPUM_3549___a     99 EIKQLVAFIRAKNTLKV---    115


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