Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05524 and BPUM_3545

See DNA alignment / Visit BSNT_05524 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:08
# Commandline: needle
#    -asequence pep-align/BSNT_05524___ywqH.1.24716.seq
#    -bsequence pep-align/BPUM_3545.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05524___ywqH-BPUM_3545.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05524___ywqH-BPUM_3545.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05524___ywqH
# 2: BPUM_3545
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 147
# Identity:      60/147 (40.8%)
# Similarity:    84/147 (57.1%)
# Gaps:          13/147 ( 8.8%)
# Score: 266.0
# 
#
#=======================================

BSNT_05524___      1 MGYESMLADIKSSLNGKIS----DVEDKIEKLKKAKKDIDTLQEEAITEI     46
                         ..|:|:.|:|||.|:    ::|:||.:|||||..::..|:.|.|::
BPUM_3545          1 ----MSLSDMLSALNGGITSKKVEIEEKIARLKKAKSKVEREQDAAETDL     46

BSNT_05524___     47 KEIVKPELGKHWTGTKADDFDKGREEAKSEASKIVNDKYNEYMASIQSKI     96
                     |:|.:|:||..|.|.::.||...|.||......||||||..|::.|:.||
BPUM_3545         47 KQIKQPKLGTSWKGERSQDFKSERNEAHDALQTIVNDKYPRYVSRIEFKI     96

BSNT_05524___     97 FWLETEKFELNLTKSAANAAGDLLAKGEDFVEEAGRQISKLKWW---    140
                     ..||.|:..|:...|.|..|..|..||||.||:|.|.|||.  |   
BPUM_3545         97 STLEAEQAALSFASSLAGDAARLAEKGEDAVEDAKRLISKA--WSSL    141


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