Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03464 and BPUM_3532
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:59
# Commandline: needle
# -asequence pep-align/BSNT_03464___ribD.1.24716.seq
# -bsequence pep-align/BPUM_3532___ribD1.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03464___ribD-BPUM_3532___ribD1.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03464___ribD-BPUM_3532___ribD1.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03464___ribD
# 2: BPUM_3532___ribD1
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 364
# Identity: 182/364 (50.0%)
# Similarity: 258/364 (70.9%)
# Gaps: 4/364 ( 1.1%)
# Score: 963.0
#
#
#=======================================
BSNT_03464___ 1 --MEEYYMKLALDLAKQGEGQTESNPLVGAVVVKDGQIVGMGAHLKYGEA 48
..|.||.|||:.|:..:|||..|||||||:|::.:|||:|||:|.||.
BPUM_3532___r 1 MPHHERYMNLALENARAMKGQTSPNPLVGAVIVRENEIVGVGAHMKAGEP 50
BSNT_03464___ 49 HAEVHAIHMAGAHAEGADIYVTLEPCSHYGKTPPCAELIINSGIKRVFVA 98
|||:||:.|||..|:||.||||||||||:|:|.||||.::.:|::.|.||
BPUM_3532___r 51 HAEIHALKMAGDKAKGATIYVTLEPCSHHGRTGPCAEALVKAGVETVVVA 100
BSNT_03464___ 99 MRDPNPLVAGRGISMIKEAGIEVREGILADQAESLNEKFLHFMRTGLPYV 148
..|||||||||||:::::|||:|..|:|..::..:||.|.||:....|:|
BPUM_3532___r 101 ALDPNPLVAGRGIAILQDAGIQVITGVLEQESILMNEVFNHFITKKTPFV 150
BSNT_03464___ 149 TLKAAASLDGKIATSTGDSKWITSEAARQDAQQYRKTHQSILVGVGTVKA 198
||||..:||||||::|.||||||||.:|.||...|..:.:||||..||..
BPUM_3532___r 151 TLKAGITLDGKIASATSDSKWITSETSRYDAHHIRSINDAILVGAQTVIH 200
BSNT_03464___ 199 DNPSLTCRLPNVTKQPVRVILDTVLSIPEDAKVICDQIAPTWIFTTARAD 248
|:||||.|:|| ...|:|::||:.||.|..||::.||:||||||||.:||
BPUM_3532___r 201 DDPSLTARIPN-GNHPIRIVLDSKLSTPLTAKIVTDQMAPTWIFTTKQAD 249
BSNT_03464___ 249 EEKKKRLSAFGVNIFTLETE-RIQIPDVLKILAEEGIMSVYVEGGSAVHG 297
|||:..|.|.||::|..::| |:.:.:||::|.|:.:.|:.:|||..::.
BPUM_3532___r 250 EEKRAALEAAGVSVFVTDSETRVPLQEVLQMLGEKNVSSLMIEGGGQINA 299
BSNT_03464___ 298 SFVKEGCFQEIIFYFAPKLIGGTHAPSLISGEGFQSMKDVPLLQFTDITQ 347
||:::....:::.|.|||||||..:||...|||.:.|.|...|....:..
BPUM_3532___r 300 SFLEQQLVDKLVIYMAPKLIGGRLSPSFFGGEGIRLMSDAIELDQLSVET 349
BSNT_03464___ 348 IGRDIKLTAKPTKE 361
:|:|||:|..|..:
BPUM_3532___r 350 LGKDIKITGYPVYQ 363
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