Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01369 and BPUM_3530

See DNA alignment / Visit BSNT_01369 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:58
# Commandline: needle
#    -asequence pep-align/BSNT_01369___yfiE.1.24716.seq
#    -bsequence pep-align/BPUM_3530.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01369___yfiE-BPUM_3530.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01369___yfiE-BPUM_3530.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01369___yfiE
# 2: BPUM_3530
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 309
# Identity:     114/309 (36.9%)
# Similarity:   164/309 (53.1%)
# Gaps:          36/309 (11.7%)
# Score: 505.5
# 
#
#=======================================

BSNT_01369___      1 MTSIHEDTHIGYAKLTIRSLERSLQFYCNVIGFQVLKKTDRQAELTADGK     50
                     |.:| |:..:|..:|.:.|.|||:.||.:::||.:|:|||....|.::.|
BPUM_3530          1 MKTI-EELRLGVTELHVSSFERSIPFYTDILGFSILEKTDSTVTLGSNAK     49

BSNT_01369___     51 RVLLILEENPSAVVLPERSVTGLYHFAILLPDRKELGIALARLIEHGI-A     99
                     ..:|:|:|:......|:.. .||||||:|||.||.||..||.:|:.|. .
BPUM_3530         50 EPILLLKEDAQLKEKPDHE-PGLYHFAVLLPTRKNLGTWLAHVIKKGYPL     98

BSNT_01369___    100 IGHGDHAVSEALYLSDPDGNGIEMYADRPRSTWQRDR-----EGNYVMTT    144
                     ||..||..|||:|||||||.|:|:|||||...|..:.     .||     
BPUM_3530         99 IGASDHFFSEAIYLSDPDGIGVEIYADRPEDVWVGEHGELKGGGN-----    143

BSNT_01369___    145 TAVDIEGLLEEAGDERKTSLPNDTIIGHIHLHISDLKEAKAFYTDVLGFD    194
                     ..:|.:|||:||.|.....||..|::||:|.|::. :||.:||.:.|||.
BPUM_3530        144 APLDGDGLLQEAADTTWEGLPAGTVMGHLHFHLNP-EEADSFYVNTLGFH    192

BSNT_01369___    195 IVGNYAGMSALFVSAGGYHHHIGLNIWA-GRNAPPKPTNASGLDYYTVVL    243
                     |  ..|..:::|::||.||||:..|.|. ||.....| ..||:..||:|.
BPUM_3530        193 I--RMAPPASVFIAAGVYHHHLAFNAWGRGRKGAIDP-RFSGIRSYTLVF    239

BSNT_01369___    244 PHQEELDLVANRVKHAGYSIEETENSFRVKDPVSGAYITFVI--------    285
                     |.:.:...|..|:..||..::....|....||. |..:...|        
BPUM_3530        240 PQEADRQSVVERLTKAGTPVKTVGKSNEFVDPF-GVLVRLQIEETDKKEG    288

BSNT_01369___    285 ---------    285
                              
BPUM_3530        289 AEYGQTHRS    297


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