Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05922 and BPUM_3514
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:29
# Commandline: needle
# -asequence pep-align/BSNT_05922___sigY.1.24716.seq
# -bsequence pep-align/BPUM_3514___sigY.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05922___sigY-BPUM_3514___sigY.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05922___sigY-BPUM_3514___sigY.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05922___sigY
# 2: BPUM_3514___sigY
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 178
# Identity: 100/178 (56.2%)
# Similarity: 133/178 (74.7%)
# Gaps: 2/178 ( 1.1%)
# Score: 546.0
#
#
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BSNT_05922___ 1 MDTQEEQRLIQQAKEGNDEAFTALFHYHYSFLYKYLLKLSLHPDLSEELV 50
|:..||..|||:||:|:|.|||||:.:||||||:|::||:|..:|:||::
BPUM_3514___s 1 MEQAEETLLIQRAKQGDDAAFTALYRHHYSFLYRYIMKLTLQQELAEEIM 50
BSNT_05922___ 51 QETFLKGYIHLRSFQGRSKFSTWLISIASRLYLDHQKKRKREWKRNQTVT 100
|||.||.|:.|.||:|.|.|||||||||||.:||||||||||..|.....
BPUM_3514___s 51 QETMLKAYMKLSSFRGDSLFSTWLISIASRQFLDHQKKRKREQLREGKAN 100
BSNT_05922___ 101 EETIRKIKWDVSAKGAEWSETLDLFSKLDPKLRTPVLLRHYYGYTYAEIG 150
:||:|:.||::..||..|.|..|..::|..:.|.|::|.:|||:||.||.
BPUM_3514___s 101 QETMRRFKWEIQQKGHTWHEMWDALNELKAQERAPIILHYYYGFTYPEIA 150
BSNT_05922___ 151 MMLQIKEGTVKSRVHKGLQQIRKEWDDE 178
.||.::|||||||||.||::|||||.
BPUM_3514___s 151 SMLGMREGTVKSRVHHGLKKIRKEWS-- 176
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