Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05906 and BPUM_3507
See
DNA alignment /
Visit
BSNT_05906 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:28
# Commandline: needle
# -asequence pep-align/BSNT_05906___licR.1.24716.seq
# -bsequence pep-align/BPUM_3507.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05906___licR-BPUM_3507.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05906___licR-BPUM_3507.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05906___licR
# 2: BPUM_3507
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 654
# Identity: 325/654 (49.7%)
# Similarity: 470/654 (71.9%)
# Gaps: 32/654 ( 4.9%)
# Score: 1725.0
#
#
#=======================================
BSNT_05906___ 1 -------------MAAEAPVTSSFFAAQLNVTMRTARNDIKELQGVLSGH 37
||||.|:||:..:..|.||.||.|.|||||...|:.:
BPUM_3507 1 MLSKRLAHILSQLMAAETPLTSAALSVSLQVTSRTVRTDIKELNDRLAPY 50
BSNT_05906___ 38 GAFVQSVRGSGYKLRIDDEQVFRTLLQDVFQQKKGLPVLPEERMAYLMKR 87
.|.|.:|||:||:|.|:||..||..:::..:|::.|.||||||:.:::|:
BPUM_3507 51 QAAVSAVRGAGYELLINDENAFRRFMKEEVEQEEPLAVLPEERVRFILKK 100
BSNT_05906___ 88 LLLADHYLKLDELAEELFISKSTLQTDLKEVKKRLLPYRIVMETRPNYGF 137
||||:.|:||::|.|:|||||||:..|:|.||::|.|:.:.:|.:||.|.
BPUM_3507 101 LLLAESYVKLEDLQEQLFISKSTMSNDMKWVKRKLEPFDLKLEAKPNKGC 150
BSNT_05906___ 138 KLRGDEVQMRYCMAEYIVDERETEIDVLNEKADILPKEEIEIIRSAILKK 187
:::|.|:::||||:||:.:||.:...:||....||||.|:|:|:..|:..
BPUM_3507 151 RIKGSEMKIRYCMSEYLFNERRSYQTMLNTAVTILPKHELELIQKTIIDY 200
BSNT_05906___ 188 MKNDRIPLSNMGLNNLIIHIAIACKRIRTENYVSLFPKDMDHILHQKEYQ 237
:..:|:.||::.:||||:|:||||||||..||||:.|::::.|...|||:
BPUM_3507 201 INEERMNLSDICMNNLIVHVAIACKRIRHGNYVSVLPEEINEIPRAKEYK 250
BSNT_05906___ 238 AAEAIVKELESKLSVTFPKEETAYITMHLLGTKRMTQSQCGEDTFS---- 283
.|:.:|:.||..|.|:||:||..||.:|||||.:|.|| ||
BPUM_3507 251 VAKKMVERLEGLLDVSFPQEEIVYIAIHLLGTAKMVQS------FSSSGQ 294
BSNT_05906___ 284 ---IEEETDQLTLAMIKAVDRELKLGILHDKELKIGLALHMKPAISRNRY 330
::::|.:|...|:||:|::|:|.:..|.||.|||:||:|||::|.:|
BPUM_3507 295 KQIVDDDTSRLVQLMLKAIDQKLQLDLAGDAELLIGLSLHLKPAMTRCKY 344
BSNT_05906___ 331 GMNLRNPMLAAIKEHYPLAFEAGIIAGIVIKEQTGIEIHENEIGYLALHF 380
|||||||||..||..|||||||||:|..||:|:||:.||||||||:||||
BPUM_3507 345 GMNLRNPMLDEIKAGYPLAFEAGIVASRVIEEETGLCIHENEIGYIALHF 394
BSNT_05906___ 381 GAAIERKKTESPPKRCIIVCASGAGSAQLLREKLRSHFGKRLDILGTAEY 430
|||:||:|.|.|||||:||||||||||:||:::|||.||.:|.||||||.
BPUM_3507 395 GAALERRKMEIPPKRCLIVCASGAGSARLLQDRLRSQFGSKLTILGTAEL 444
BSNT_05906___ 431 YSLDQMSYESIDFVISTIPIKKELPVPVLKVNTILGGTDFTKIESILSDE 480
|||..:|..::|.:|:|:||:.::|:||::|||||||.||.|||..|:.|
BPUM_3507 445 YSLPHVSLHALDLIITTVPIQMDIPIPVIQVNTILGGGDFLKIEEALTSE 494
BSNT_05906___ 481 KE--KANRYLKKELVFFQEDLRSKEEVIQFLGQKAVECGFAREEIIDSIF 528
.. .|::|:||||||.:...::|||||.||.:|.::.|.|..|:..|:.
BPUM_3507 495 TRVTLASQYMKKELVFTKRAFQTKEEVIAFLTKKVIDMGLAPAELTPSVM 544
BSNT_05906___ 529 EREDMSPTCFGNLVAIPHPLVPQTKTTFWAVCTLKKPIDWESQRVQFVCL 578
|||:.:||.||:..|||||:.|.|:.||||:|||:|||.|..::||||||
BPUM_3507 545 EREEAAPTSFGHYTAIPHPMTPLTEETFWAICTLEKPIIWGEKKVQFVCL 594
BSNT_05906___ 579 LCVEKENKADLQSMYKLLGSILDDPAAVNQLVKCRSYQELSDVFDQKMLS 628
|||||||..||:.||:|||.::.:...:..|:.|.:::::.|:..:|..|
BPUM_3507 595 LCVEKENAKDLKGMYRLLGELVHNVKFIQHLIACDTFEDMLDIMYKKAPS 644
BSNT_05906___ 628 ---- 628
BPUM_3507 645 YKNS 648
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.