Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05901 and BPUM_3504

See DNA alignment / Visit BSNT_05901 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:28
# Commandline: needle
#    -asequence pep-align/BSNT_05901___licA.1.24716.seq
#    -bsequence pep-align/BPUM_3504___licA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05901___licA-BPUM_3504___licA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05901___licA-BPUM_3504___licA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05901___licA
# 2: BPUM_3504___licA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 110
# Identity:      72/110 (65.5%)
# Similarity:    91/110 (82.7%)
# Gaps:           2/110 ( 1.8%)
# Score: 371.0
# 
#
#=======================================

BSNT_05901___      1 MNEEMEQIIFQIILHGGNGRSSAMEAIAAAKSGDAEEARKKLQDAAEELS     50
                       .|||||:||:|||||||||||||||..||.|:.:||:.|||:|.:.|:
BPUM_3504___l      1 --MEMEQIVFQLILHGGNGRSSAMEAITCAKQGNFDEAKLKLQEAQDALN     48

BSNT_05901___     51 KAHHYQTELIQNEAGGEKTEMTLLMVHAQDHLMNAMTVKDMAAEIIELYE    100
                     :|||.||||||.|..||||:::|||:|||||||||||||::|||||||:|
BPUM_3504___l     49 EAHHAQTELIQGEIRGEKTDISLLMIHAQDHLMNAMTVKELAAEIIELHE     98

BSNT_05901___    101 KITEQRGASI    110
                     |:.:..|.:.
BPUM_3504___l     99 KMKQLGGVNS    108


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