Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05566 and BPUM_3499
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:11
# Commandline: needle
# -asequence pep-align/BSNT_05566___ywoF.1.24716.seq
# -bsequence pep-align/BPUM_3499.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05566___ywoF-BPUM_3499.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05566___ywoF-BPUM_3499.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05566___ywoF
# 2: BPUM_3499
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 482
# Identity: 224/482 (46.5%)
# Similarity: 304/482 (63.1%)
# Gaps: 21/482 ( 4.4%)
# Score: 1089.0
#
#
#=======================================
BSNT_05566___ 1 MRKWYFILLAGVLTSVILAFVYDKTKANEEGSG----DYLYVSLNGSDQN 46
|:: .:.|:|..:.:..:....:|..|.:| ...:|:.||:|:|
BPUM_3499 1 MKR----AIPGILLILFMTVISFGCQAMTEEAGAKQSTAYHVATNGNDKN 46
BSNT_05566___ 47 EGTKEKPFRTLAHASEKAAAGTTVMIREGTYHETLDVKHSGTDGKPITFR 96
.|||:||||||..|:..|.||||:.:|.|||.|.|.|:||||...|:.|:
BPUM_3499 47 PGTKQKPFRTLKKAASMAKAGTTIYVRGGTYKEKLIVRHSGTKKAPVIFQ 96
BSNT_05566___ 97 NYENENVVISGESITNAEYETPLIRIHDKHDIAISGLTIQDLSVSSEEAT 146
.|..|..||||.|:...:.:..|:.|..|..|.:.|||:..|..:.|:.|
BPUM_3499 97 AYGKEKPVISGASLKGNQADGGLVTIDQKSYITLKGLTVGHLKTNKEDLT 146
BSNT_05566___ 147 AIGIYVSGSSSHIAIKDNHIRGIKTTADEGNAHGIAVYGT---GSMKDIQ 193
.:||::.||...:.:.:|.:..|:||...||||||||||| .:::||:
BPUM_3499 147 PVGIFIKGSGKGVKLLNNRVYDIQTTHKNGNAHGIAVYGTKAPAAIEDIE 196
BSNT_05566___ 194 IEDNTVEKLTLGASEAVVLNGNIDGFTVAGNVVRNNNNIGIDLIGYEGTA 243
|:.||||||.||.|||:|||||:..|.|..|.||:.:||||||||:|..|
BPUM_3499 197 IKGNTVEKLKLGFSEALVLNGNVTKFRVTHNTVRHTDNIGIDLIGFENVA 246
BSNT_05566___ 244 --DKNDYVRNGIVENNTVYQNSTYGNPAYGDEYSAGGIYVDGGHKIEIKN 291
.|.|.||||:|..|.||:.::.||||||.:.||||||||||..|.|.:
BPUM_3499 247 PSKKYDQVRNGVVSRNKVYEITSVGNPAYGKDISAGGIYVDGGKDIVIDH 296
BSNT_05566___ 292 NTVYDNDIGIEATSEHKGKYANAIQITDNKVYNNAYTGISIGGYDKKRGG 341
|..:.||:|||.|||||||.|:.|:|..|:||.|.|||||||||||||||
BPUM_3499 297 NITHHNDLGIEVTSEHKGKMADRIRIEHNQVYLNRYTGISIGGYDKKRGG 346
BSNT_05566___ 342 TSNSLIARNIMYRNDTKGLYGGQLLLQYDTKNNTIEKNILTAGDSRLFIG 391
|:|:.|:.||:|:|||.||.|||||:||...||.|..||:||..|...:.
BPUM_3499 347 TTNTTISHNILYKNDTAGLEGGQLLMQYQAVNNRITSNIMTASASHYLVV 396
BSNT_05566___ 392 NDFTENEGNTVNHNVYHKEADQDGI----WMWKKKEYDSFSSYLKATKND 437
|.:..|:.|....|||. |:.|. |:|:.|..:.:.:||..:..|
BPUM_3499 397 NLYGVNQKNIFQKNVYD---DRKGAKASQWVWRGKWMEGYKTYLSKSGQD 443
BSNT_05566___ 438 QQSIYADPMFRDEASYDFSLDPDSPARPVIE- 468
:.|.:.:|.|.:|..|||.|...|||:.:|.
BPUM_3499 444 KGSAHLNPQFVNEKKYDFRLKKSSPAKKIIGN 475
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