Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05859 and BPUM_3486

See DNA alignment / Visit BSNT_05859 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:26
# Commandline: needle
#    -asequence pep-align/BSNT_05859___ywbH.1.24716.seq
#    -bsequence pep-align/BPUM_3486___lrgA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05859___ywbH-BPUM_3486___lrgA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05859___ywbH-BPUM_3486___lrgA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05859___ywbH
# 2: BPUM_3486___lrgA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 131
# Identity:      80/131 (61.1%)
# Similarity:   106/131 (80.9%)
# Gaps:           7/131 ( 5.3%)
# Score: 431.0
# 
#
#=======================================

BSNT_05859___      1 ---MKKLLLTVIQIALLFIFARLINWVTALLHINIPGSIIGIVILFTLLH     47
                        :|..|:.|:||..||:||:|:|.:.|.||:.|||:|:||:::|.|||
BPUM_3486___l      1 MKLLKTPLIAVLQIMALFVFAKLMNVLAAFLHLRIPGTILGILVIFLLLH     50

BSNT_05859___     48 FNIIKLEWIELGATWLLGELLLFFIPSAVGVIEYGDIMSKFGVSILLVVI     97
                     |.||:|:||||||.||||||||||||||||||:||.::|:.|.||:|||:
BPUM_3486___l     51 FKIIQLKWIELGAVWLLGELLLFFIPSAVGVIDYGTLLSQSGTSIVLVVL    100

BSNT_05859___     98 ISTFVVMVSTGTLTQLIAKRKEKKHTCSSEL    128
                     :||||||:|||.:||:||||||:|..|    
BPUM_3486___l    101 LSTFVVMLSTGIMTQMIAKRKERKKLC----    127


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