Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05858 and BPUM_3485

See DNA alignment / Visit BSNT_05858 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:26
# Commandline: needle
#    -asequence pep-align/BSNT_05858___ywbI.1.24716.seq
#    -bsequence pep-align/BPUM_3485___ywbI.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05858___ywbI-BPUM_3485___ywbI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05858___ywbI-BPUM_3485___ywbI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05858___ywbI
# 2: BPUM_3485___ywbI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 301
# Identity:     226/301 (75.1%)
# Similarity:   262/301 (87.0%)
# Gaps:           6/301 ( 2.0%)
# Score: 1223.0
# 
#
#=======================================

BSNT_05858___      1 MDIRHLTYFLEVARLKSFTKASQSLYVSQPTISKMIKNLEEELGIELFYR     50
                     |||||||||||||||||||||||||||||||||||:||||:||.::||||
BPUM_3485___y      1 MDIRHLTYFLEVARLKSFTKASQSLYVSQPTISKMVKNLEDELEVQLFYR     50

BSNT_05858___     51 NGRQVELTDAGHSMYVQAQEIIKSFQNLTSELNDIMEVKKGHVRIGLPPM    100
                     ||||||:||||.:||.||.||.:|||||||||||:|.|||||:|||||||
BPUM_3485___y     51 NGRQVEMTDAGQTMYTQASEITQSFQNLTSELNDLMNVKKGHIRIGLPPM    100

BSNT_05858___    101 IGSGFFPRVLGDFRENYPNVTFQLVEDGSIKVQEGVGDGSLDIGVVVLPA    150
                     |||.|||.|:|:||:.||:|||||||.|||||:|||.||||||||:||||
BPUM_3485___y    101 IGSSFFPNVMGEFRQQYPDVTFQLVEHGSIKVEEGVEDGSLDIGVIVLPA    150

BSNT_05858___    151 NEDIFHSFTIVKETLMLVVHPSHRLADEKECQLSELKDEPFIFFREDFVL    200
                     |:.|||::||:||.:.||.||||.:|...:..|::||:|.||||||||||
BPUM_3485___y    151 NDKIFHTYTIIKEDMKLVTHPSHPMAGRDKVDLADLKEESFIFFREDFVL    200

BSNT_05858___    201 HNRIMTECIKAGFRPHIIYETSQWDFISEMVSANLGIGLLPERICRGLDP    250
                     |:||:.||:.|||||::||||||||||||||:.|||||||||||||.|||
BPUM_3485___y    201 HSRILNECMNAGFRPNVIYETSQWDFISEMVAENLGIGLLPERICRDLDP    250

BSNT_05858___    251 EKVKVIPLVDPVIPWHLAIIWRKDRYLSFAARAWLEHTKSYLWDPKKESK    300
                     ||||||.| :..|||||.:|||||||||||||.||:|||||:|..:    
BPUM_3485___y    251 EKVKVISL-NTSIPWHLGVIWRKDRYLSFAAREWLKHTKSYVWGAE----    295

BSNT_05858___    301 G    301
                      
BPUM_3485___y    295 -    295


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