Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00393 and BPUM_3469

See DNA alignment / Visit BSNT_00393 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:16
# Commandline: needle
#    -asequence pep-align/BSNT_00393___ybfI.1.24716.seq
#    -bsequence pep-align/BPUM_3469___yesS.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00393___ybfI-BPUM_3469___yesS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00393___ybfI-BPUM_3469___yesS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00393___ybfI
# 2: BPUM_3469___yesS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 346
# Identity:      66/346 (19.1%)
# Similarity:   114/346 (32.9%)
# Gaps:         136/346 (39.3%)
# Score: 148.0
# 
#
#=======================================

BSNT_00393___      1 ------------------------------------------------MQ      2
                                                                     .|
BPUM_3469___y      1 MKKEAFAFRFHHSDVTLPAQIWSVGWEVQSSSLYSWNGVERKDQGKCIFQ     50

BSNT_00393___      3 NETRTLQLDPH--LHIEAYRFK-----GIMQKFPNHFHDYYVIGFIEKGQ     45
                          |.|..|  :.|...|||     ..:.|.|:.: .||   |.|..:
BPUM_3469___y     51 -----LTLSGHGMIEIGEKRFKVLPGQAFLVKSPSAY-QYY---FPEDSE     91

BSNT_00393___     46 R----YLA--------CQDQEYIINPGDLLLFNPRDTHSCEQIDGRTLDY     83
                     .    ||.        |.|| :|.....::.|:|..              
BPUM_3469___y     92 HWEFLYLTLYGESCDLCFDQ-FIDQGKQVMRFHPNS--------------    126

BSNT_00393___     84 RCINVMPDIMEKA-VKEITGSGHLPYFSQHVLFRHELTASLQELHILISE    132
                     |.|.::..|.::| .:.||.    |:....:.::..:             
BPUM_3469___y    127 RPIRLLKTIYDEASERRITN----PFEGSSLAYQFVM-------------    159

BSNT_00393___    133 EKQALRKEELFLHL--LEELIRHYSDVTFLSSVPEPSDEVKMVCEFLEEH    180
                             ||:.:|  ||..:..:         |||   :.....|...|
BPUM_3469___y    160 --------ELYSYLPKLEGQMEKW---------PEP---IVQAALFASHH    189

BSNT_00393___    181 YAENVTLNDLSELTGWSKYHLLRSFTKQKGITPNSYMETIRINQAKKLLE    230
                     :.|.:..:|::.....||.|..|.|.|..|.||..|:..||:.:|:.||:
BPUM_3469___y    190 FHEEIGPDDMAAAARLSKSHFTREFKKATGFTPIHYLTNIRLEKAETLLK    239

BSNT_00393___    231 QGVRPI-DAAFQTGFSDQSHMTKFFKRQVGLTPKQYMKIFEKELHR    275
                     .....| :.|.|.|:.:.:::.|.|::::|::|||..:..:.    
BPUM_3469___y    240 TTKYSIEEIAIQCGYRNANYLNKVFRKKIGMSPKQLRETSDA----    281


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