Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05948 and BPUM_3467

See DNA alignment / Visit BSNT_05948 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:30
# Commandline: needle
#    -asequence pep-align/BSNT_05948___galE.1.24716.seq
#    -bsequence pep-align/BPUM_3467___galE1.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05948___galE-BPUM_3467___galE1.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05948___galE-BPUM_3467___galE1.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05948___galE
# 2: BPUM_3467___galE1
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 349
# Identity:     151/349 (43.3%)
# Similarity:   206/349 (59.0%)
# Gaps:          29/349 ( 8.3%)
# Score: 706.5
# 
#
#=======================================

BSNT_05948___      1 MAILVTGGAGYIGSHTCVELLNSGYEIVVLDNLSNSSAEALNRVKEITGK     50
                     |.|||.|||||||||....||..|..:||:|||.....||:     :.|.
BPUM_3467___g      1 MTILVCGGAGYIGSHAVAALLAKGERVVVVDNLQTGHKEAV-----LEGA     45

BSNT_05948___     51 DLTFYEADLLDREAVDAVFAENEIEAVIHFAGLKAVGESVAIPLKYYHNN    100
                     .|.  :.||.|...:..||..::||||:|||....|||||..|||||.||
BPUM_3467___g     46 VLE--KGDLRDHAFLRQVFKTHQIEAVMHFAADSLVGESVTDPLKYYDNN     93

BSNT_05948___    101 LTGTFILCEAMEKYGVKKIVFSSSATVYGVPETSPITEDFPLGATNPYGQ    150
                     :.|...|.:.|.::.||.|||||:|..||.|:..||.|......|||||:
BPUM_3467___g     94 VGGATALLQVMNEFDVKHIVFSSTAAAYGEPKRVPIVETDETNPTNPYGE    143

BSNT_05948___    151 TKLMLEQILRDLHTADNEWS-------VALLRYFNPFGAHPSGRIGED--    191
                     |||.:|::|:        ||       ..:|||||..|||..|.:|||  
BPUM_3467___g    144 TKLAIEKMLK--------WSEEAYGIEYVVLRYFNVAGAHTEGLVGEDHQ    185

BSNT_05948___    192 PNGIPNNLMPYVAQVAVGKLEQLSVFGNDYPTKDGTGVRDYIHVVDLAEG    241
                     |.   .:|:|.:.|||:||.:|:.::|:||.|:|||.:||||||:||.|.
BPUM_3467___g    186 PE---THLIPIILQVALGKRDQIMIYGDDYETEDGTCIRDYIHVMDLVEA    232

BSNT_05948___    242 HVKALEKVLNSTGADAYNLGTGTGYSVLEMVKAFEKVSGKEVPYRFADRR    291
                     |:.|::::....|:..||||.|||:||.::|:|..||:|..:|.:.|.||
BPUM_3467___g    233 HILAVDRLRAGKGSATYNLGNGTGFSVKQVVEAVRKVTGHAIPAQVAKRR    282

BSNT_05948___    292 PGDIATCFADPAKAKRDLGWEAK-RGLEEMCADSWRWQSSNVNGYKSAE    339
                     .||.|...|...||.::|||..: ..|..:...:|.|...:.:||:|. 
BPUM_3467___g    283 AGDPAKLIASSEKALQELGWTPQYADLHTIIQSAWDWFQKHPDGYQSE-    330


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