Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05842 and BPUM_3466

See DNA alignment / Visit BSNT_05842 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:25
# Commandline: needle
#    -asequence pep-align/BSNT_05842___galT.1.24716.seq
#    -bsequence pep-align/BPUM_3466___galT.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05842___galT-BPUM_3466___galT.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05842___galT-BPUM_3466___galT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05842___galT
# 2: BPUM_3466___galT
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 517
# Identity:     313/517 (60.5%)
# Similarity:   378/517 (73.1%)
# Gaps:          15/517 ( 2.9%)
# Score: 1674.5
# 
#
#=======================================

BSNT_05842___      1 --MSIIEHLEQLLEYGLERKLISIWDREYTRNRLYEALGITHPEPVSSTS     48
                       :.|.|.||||::||:.:|||:..|.|||||||.|.|.:...|   :.:
BPUM_3466___g      1 MAIDIFEKLEQLIQYGINKKLITSLDIEYTRNRLLEVLRLDEAE---TRT     47

BSNT_05842___     49 IKQSQSLPDLLAPIYKWAAETGRMEADTDTYRDLLSAKLMGCFVPAPSEV     98
                     :...:.|.|:|.|:..||.|||.:...||||||||.||:|||.|..||.:
BPUM_3466___g     48 VPGEEDLEDILMPMLDWAVETGLIPEGTDTYRDLLDAKIMGCLVAPPSVI     97

BSNT_05842___     99 IRKFEETKALYGPKQATKEFYQYSEDVYYIRTDRIAKNVHWTVPTEYGEL    148
                     ..||||.:...|||.||..||:..:..:||.|.||||||.|..||:.|.|
BPUM_3466___g     98 YAKFEEKRKQEGPKAATSWFYEMQKHAHYIHTGRIAKNVQWFTPTDDGVL    147

BSNT_05842___    149 EMTINLSKPEKDPKAIAAAKEQEQTNYPMCLLCKENVGFEGSVNHPARQN    198
                     |:|||||||||||||||.||:..|..||:||||||||||||.||||||||
BPUM_3466___g    148 EITINLSKPEKDPKAIAQAKKLSQKQYPLCLLCKENVGFEGRVNHPARQN    197

BSNT_05842___    199 HRIIPVILEDEQWFLQFSPYVYYPEHCIVLKGEHEPMEISKKTFGRLLAF    248
                     ||||||.|..|.|||||||||||.|||||.||:||||.|:||||.|||:|
BPUM_3466___g    198 HRIIPVSLSGESWFLQFSPYVYYNEHCIVFKGKHEPMSITKKTFERLLSF    247

BSNT_05842___    249 LGQYPHYFIGSNADLPIVGGSILSHDHFQGGAHDFPMARAEAEDVYELND    298
                     :..||||||||||||||||||||||||||||||:||||:||.|:|:.|..
BPUM_3466___g    248 ISIYPHYFIGSNADLPIVGGSILSHDHFQGGAHEFPMAKAEMEEVFSLKA    297

BSNT_05842___    299 YPGVSLGLVKWPMSVLRLQGDEPGHVAEAADHIFRTWQTYSDEKAGIAAY    348
                     :|.|..|:|||||||:||:..|...:|:|||.|...|:.||||:.|:.|:
BPUM_3466___g    298 FPNVRAGIVKWPMSVIRLRSSEQQSLADAADFILHEWKLYSDEEVGVIAH    347

BSNT_05842___    349 TGDTPHNTVTPIARRRGDLYELDIVLRNNRTDEEHPLGIFHPHQEVHHIK    398
                     ||:|||||:||||||.||.||||:|||||||:::||.||||||:||||||
BPUM_3466___g    348 TGETPHNTITPIARRHGDDYELDLVLRNNRTNKQHPDGIFHPHEEVHHIK    397

BSNT_05842___    399 KENIGLIEVMGLAILPGRLQEEMKETAAALCSADPKTALEQNPLTAKHSE    448
                     |||||||||||||:|||||.||:.:...||.|..|...::..|...||..
BPUM_3466___g    398 KENIGLIEVMGLAVLPGRLAEELSQLKEALLSESPLEEIKARPEIMKHEA    447

BSNT_05842___    449 WALRMMEKRTITKENADLVIKEELGHVFARILEHAGVFKQTAVGKQAFRR    498
                     ||.||:|:.|.|::|...::::|||.:|:|||..|||||:|..||.||.|
BPUM_3466___g    448 WAKRMLEENTFTEDNTQTILQKELGVIFSRILSQAGVFKRTEQGKTAFNR    497

BSNT_05842___    499 FID--QLGAKPVKSLNR    513
                     ||.  |.|.        
BPUM_3466___g    498 FIQTLQTGR--------    506


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