Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05837 and BPUM_3464

See DNA alignment / Visit BSNT_05837 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:25
# Commandline: needle
#    -asequence pep-align/BSNT_05837___qoxA.1.24716.seq
#    -bsequence pep-align/BPUM_3464___qoxA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05837___qoxA-BPUM_3464___qoxA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05837___qoxA-BPUM_3464___qoxA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05837___qoxA
# 2: BPUM_3464___qoxA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 322
# Identity:     238/322 (73.9%)
# Similarity:   278/322 (86.3%)
# Gaps:           7/322 ( 2.2%)
# Score: 1273.5
# 
#
#=======================================

BSNT_05837___      1 ----MFRALKPLLVLALLTVVFVLGGCSNASVLDPKGPVAEQQSDLILLS     46
                         :|||:||:|:||:|..||:||||||.:|||||||||.||.||||||
BPUM_3464___q      1 MVIFLFRAIKPMLLLAMLVSVFLLGGCSNIAVLDPKGPVAAQQKDLILLS     50

BSNT_05837___     47 IGFMLFIVGVVFVLFTIILVKYRDRKGKDNGSYNPEIHGNTFLEVVWTVI     96
                     |||||||||.|||||||||||||:||...|.|||||:||||.||||||||
BPUM_3464___q     51 IGFMLFIVGAVFVLFTIILVKYRERKDVGNASYNPELHGNTLLEVVWTVI    100

BSNT_05837___     97 PILIVIALSVPTVQTIYSLEKAPEATKDKEPLVVYATSVDWKWVFSYPEQ    146
                     |||||.|||||||:||||||:||:||..|:|||||||:|||||:|||||:
BPUM_3464___q    101 PILIVAALSVPTVKTIYSLEEAPQATSHKDPLVVYATAVDWKWIFSYPEE    150

BSNT_05837___    147 DIETVNYLNIPVDRPILFKISSADSMASLWIPQLGGQKYAMAGMLMDQYL    196
                     :||||||||||.|:|:||||:|||:|||||||||||:|||||||.|:|||
BPUM_3464___q    151 NIETVNYLNIPKDQPVLFKITSADTMASLWIPQLGGEKYAMAGMEMEQYL    200

BSNT_05837___    197 QADKVGTYEGRNANFTGEHFADQEFDVNAVTEKDFNSWVKKTQNEAPKLT    246
                     |||:||||||||||||||.||.|:|.|||:.:.|::.||.||:.||||||
BPUM_3464___q    201 QADQVGTYEGRNANFTGEGFAQQKFKVNAMKQSDYDKWVSKTKKEAPKLT    250

BSNT_05837___    247 KEKYDELMLPENVDELTFSSTHLKYVDHGQDAEYAMEARKRLGYQAVSPH    296
                     |:.||.||||:..|..|||||||.:..||:|:|||::||||||||:||||
BPUM_3464___q    251 KKTYDYLMLPDAADVQTFSSTHLSFAKHGEDSEYALQARKRLGYQSVSPH    300

BSNT_05837___    297 SKTDPFENVKKNEFKKSDDTEE    318
                     ||||||||||  .:|:..|.| 
BPUM_3464___q    301 SKTDPFENVK--NYKRKLDNE-    319


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