Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05833 and BPUM_3461

See DNA alignment / Visit BSNT_05833 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:25
# Commandline: needle
#    -asequence pep-align/BSNT_05833___qoxD.1.24716.seq
#    -bsequence pep-align/BPUM_3461___qoxD.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05833___qoxD-BPUM_3461___qoxD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05833___qoxD-BPUM_3461___qoxD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05833___qoxD
# 2: BPUM_3461___qoxD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 128
# Identity:      88/128 (68.8%)
# Similarity:   101/128 (78.9%)
# Gaps:           6/128 ( 4.7%)
# Score: 466.0
# 
#
#=======================================

BSNT_05833___      1 MANK---SAEHSHFPWKHIVGFILSIVLTLLALWVAVYTDLSSSAKLWII     47
                     ||.|   ||||.||||||:||||||||||:||.|:|:..::.||||||||
BPUM_3461___q      1 MAGKTHSSAEHEHFPWKHVVGFILSIVLTVLAFWIAIGAEIGSSAKLWII     50

BSNT_05833___     48 FGFAFIQAALQLLMFMHMTESENGTIQVGNTLFGFFGAIVIVLGSIWIFA     97
                     ||||||||.|||.||||||||||||:||||||||.|.||:.|:||:||||
BPUM_3461___q     51 FGFAFIQAFLQLFMFMHMTESENGTVQVGNTLFGLFCAIIFVIGSVWIFA    100

BSNT_05833___     98 AHYHHGDH-MDGNPPGGAEHSEHSGHNE    124
                     |||.||:: .||..|...:.||||..  
BPUM_3461___q    101 AHYSHGENSKDGYSPSAPKQSEHSEK--    126


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