Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05831 and BPUM_3460

See DNA alignment / Visit BSNT_05831 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:24
# Commandline: needle
#    -asequence pep-align/BSNT_05831___ywcE.1.24716.seq
#    -bsequence pep-align/BPUM_3460___ywcE.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05831___ywcE-BPUM_3460___ywcE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05831___ywcE-BPUM_3460___ywcE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05831___ywcE
# 2: BPUM_3460___ywcE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 89
# Identity:      58/89 (65.2%)
# Similarity:    76/89 (85.4%)
# Gaps:           3/89 ( 3.4%)
# Score: 337.0
# 
#
#=======================================

BSNT_05831___      1 MMDMFFAYLLVASATPLFIWLDNKKVALSAIPPIILMWVFFFFYATESLS     50
                      ||||||||.:|:|||||:||:|:|:||::||||::||:||..|.|.|||
BPUM_3460___y      1 -MDMFFAYLCIATATPLFLWLENRKIALASIPPIMIMWIFFGLYMTSSLS     49

BSNT_05831___     51 PLGHTLMIILFAVNVIVAHIAAFIIYGLPYLRRKRSS--     87
                     |.|||.||..||:|||:||||||:|||||::|::.||  
BPUM_3460___y     50 PAGHTFMIAFFAINVILAHIAAFLIYGLPFIRKRFSSTR     88


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