Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05827 and BPUM_3458

See DNA alignment / Visit BSNT_05827 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:24
# Commandline: needle
#    -asequence pep-align/BSNT_05827___nfrA.1.24716.seq
#    -bsequence pep-align/BPUM_3458___nfrA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05827___nfrA-BPUM_3458___nfrA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05827___nfrA-BPUM_3458___nfrA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05827___nfrA
# 2: BPUM_3458___nfrA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 249
# Identity:     161/249 (64.7%)
# Similarity:   199/249 (79.9%)
# Gaps:           0/249 ( 0.0%)
# Score: 851.0
# 
#
#=======================================

BSNT_05827___      1 MNNTIETILNHRSIRSFTDQLLTAEEIDTLVKSAQAASTSSYVQAYSIIG     50
                     ||.||||||||||||||||:.|:.||:.||:|||||||||||||||||||
BPUM_3458___n      1 MNKTIETILNHRSIRSFTDERLSEEEVLTLIKSAQAASTSSYVQAYSIIG     50

BSNT_05827___     51 VSDPEKKRELSVLAGNQPYVEKNGHFFVFCADLYRHQQLAEEKGEHISEL    100
                     |:|.:||.:|:.|||||||||||||||||||||.||..:|::.|::..|.
BPUM_3458___n     51 VTDQKKKAKLAELAGNQPYVEKNGHFFVFCADLKRHDDIAKKAGKNHQEA    100

BSNT_05827___    101 LENTEMFMVSLIDAALAAQNMSIAAESMGLGICYIGGIRNELDKVTEVLQ    150
                     |||||.|::|:||.|||||||||||||||||||||||:||:|.:|:::|:
BPUM_3458___n    101 LENTEAFLISVIDTALAAQNMSIAAESMGLGICYIGGLRNQLREVSDLLE    150

BSNT_05827___    151 TPDHVLPLFGLAVGHPANLSGKKPRLPKQAVYHENTYNVNTDDFRHTMNT    200
                     ||.:|||||||.|||||:.|.:|.|||.:.:||||:|..:.......:..
BPUM_3458___n    151 TPSYVLPLFGLVVGHPASQSSQKERLPVELIYHENSYQQDEAHVDRYLKE    200

BSNT_05827___    201 YDKTISDYYRERTNGQREETWSDQILNFMKQKPRTYLNDYVKEKGFNKN    249
                     ||..||.||.|||||:|.:|||.|:|....|..|.:|.::|||||||:.
BPUM_3458___n    201 YDDRISSYYEERTNGERTDTWSKQMLRGFSQPKRAFLGEFVKEKGFNRK    249


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