Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05821 and BPUM_3453

See DNA alignment / Visit BSNT_05821 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:24
# Commandline: needle
#    -asequence pep-align/BSNT_05821.1.24716.seq
#    -bsequence pep-align/BPUM_3453___sacT.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05821-BPUM_3453___sacT.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05821-BPUM_3453___sacT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05821
# 2: BPUM_3453___sacT
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 277
# Identity:     113/277 (40.8%)
# Similarity:   131/277 (47.3%)
# Gaps:         115/277 (41.5%)
# Score: 578.0
# 
#
#=======================================

BSNT_05821         0 --------------------------------------------------      0
                                                                       
BPUM_3453___s      1 MKIYKILNNNAVVVKEGDQEKIVMGPGIAFQKGKNDVVPVQKIEKIFVVR     50

BSNT_05821         0 --------------------------------------------------      0
                                                                       
BPUM_3453___s     51 EENEKFKQILATLPEAHIEVAEHIISYAEGELMMPLSDHIHISLTDHLSF    100

BSNT_05821         1 --------------MLHEIKALYKKEYEIGLWAIGHVKETLGMSLPEDEA     36
                                   :|.|||.|||:||:||.:||.:|||.||:.||:|||
BPUM_3453___s    101 AIERIQKGIVLYNKLLGEIKVLYKQEYDIGKYAIRYVKERLGVELPDDEA    150

BSNT_05821        37 GYIALHIHTAKMDAESMYSALKHTTMIKEMIEKIEQYFNRKVDENSISYQ     86
                     ||:|||||||||:.|||...:|:|||||||||.||.||...:||:|||||
BPUM_3453___s    151 GYVALHIHTAKMNTESMKKTVKYTTMIKEMIEHIESYFQYSIDEDSISYQ    200

BSNT_05821        87 RLVTHLRYAVSRLESNEALHRMDEEMLYFIQKKYSFAYQCALELAEFLKN    136
                     |||||||||:.|||||||...||::||.|||.||..|||||..||:.|||
BPUM_3453___s    201 RLVTHLRYALGRLESNEAFQIMDDDMLSFIQTKYDLAYQCARGLADLLKN    250

BSNT_05821       137 EYQLHLPESEAGYITLHVQRLQDLSE-    162
                     ||.|:|||||.||||||||||||... 
BPUM_3453___s    251 EYGLYLPESEIGYITLHVQRLQDAELV    277


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